DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11313 and C1r

DIOPT Version :10

Sequence 1:NP_651821.3 Gene:CG11313 / 43646 FlyBaseID:FBgn0039798 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001128027.1 Gene:C1r / 312705 RGDID:1309091 Length:707 Species:Rattus norvegicus


Alignment Length:338 Identity:81/338 - (23%)
Similarity:132/338 - (39%) Gaps:90/338 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 SDQSDLPFVCCTPDTDYNTTRARPNDEVIHS--TLLPDRSICGGDIAYNQITK------GNETVL 124
            |.:|......|||...:.      |:|....  ..||   :||..:  |.:|:      |.:...
  Rat   419 SSESVRGIYTCTPQGIWK------NEEEGEKMPRCLP---VCGKPV--NPVTQKQRIIGGQKANP 472

  Fly   125 TEFAWMVLLEYRPHDGQQLRTYCAGSLINNRYVVTAAHCVSAATRARKGDVSFRVSVRLGEHNTS 189
            ..|.|..........|        |:|:.:|:::||||.:......::.:|:....|.||..|  
  Rat   473 GNFPWQAFTNIHGRGG--------GALLGDRWILTAAHTIYPKEHNKENNVNVSKDVFLGHTN-- 527

  Fly   190 AVVDCLNGRCLPEPVQIAVEEIR-----------IHESF---GTRLFWNDIALIRLAREVAYSPS 240
                              ||||:           ||..:   ....|..||||:.|...|...|:
  Rat   528 ------------------VEEIKKLGHHPVRRVIIHPDYRQDEPNNFEGDIALLELENSVTLGPN 574

  Fly   241 IRPVCLPSTVGLQNWQSGQAF-------TVAGWGRTLTSESSPVKMK-LRVTYVEPGLCRR---- 293
            :.|:|||         ..:.|       .|:|:|  :|.:.....:: :|:...:...|:|    
  Rat   575 LLPICLP---------DNETFYDKDLMGYVSGFG--ITEDKIAFNLRFVRLPIADREACQRWLRT 628

  Fly   294 KYASIVVLGDSHLCAEGRSRGDSCDGDSGGPLMAFHE---GVWVLGGIVSFGLNCGSRFWPAVYT 355
            |.::.|...:.....:...:.|:|.||||| :.|..:   .:||..||||:|:.||..:  ..||
  Rat   629 KNSNDVFSQNMFCSGDPTLKHDACQGDSGG-VFAVRDRSRDIWVATGIVSWGIGCGEGY--GFYT 690

  Fly   356 NVLSYETWITQNI 368
            .:|:|..||.:.|
  Rat   691 KLLNYVDWIKKEI 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11313NP_651821.3 CLIP 24..78 CDD:463440 2/9 (22%)
Tryp_SPc 116..367 CDD:238113 68/285 (24%)
C1rNP_001128027.1 CUB 27..138 CDD:214483
FXa_inhibition 161..189 CDD:464251
CUB 195..302 CDD:395345
Sushi 309..371 CDD:459664
CCP 376..447 CDD:153056 7/33 (21%)
Tryp_SPc 463..699 CDD:214473 65/277 (23%)
Blue background indicates that the domain is not in the aligned region.

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