DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11313 and Tpsg1

DIOPT Version :10

Sequence 1:NP_651821.3 Gene:CG11313 / 43646 FlyBaseID:FBgn0039798 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001426649.1 Gene:Tpsg1 / 302990 RGDID:631355 Length:320 Species:Rattus norvegicus


Alignment Length:271 Identity:83/271 - (30%)
Similarity:127/271 - (46%) Gaps:49/271 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 AYNQITKGNETVLTEFAWMVLLEYRPHDGQQLRTYCAGSLINNRYVVTAAHCVSAATRARKGDVS 176
            |.::|..|:......:.|...|..     |::.. |.|||::..:|:|||||.|.:..:...:|.
  Rat    35 AGSRIVGGHAAQAGAWPWQASLRL-----QKVHV-CGGSLLSPEWVLTAAHCFSGSVNSSDYEVH 93

  Fly   177 F-RVSVRLGEHNTSAVVDCLNGRCLPEPVQIAVEEIRIHESF-GTRLFWNDIALIRLAREVAYSP 239
            . .:::.|..|.::                  |::|.::.|. |......||||::||..||.|.
  Rat    94 LGELTITLSPHFST------------------VKQIIMYSSAPGPPGSSGDIALVQLATPVALSS 140

  Fly   240 SIRPVCLPST-----VGLQNWQSGQAFTVAGWGRTLTSESSPVK-----MKLRVTYVEPGLCRRK 294
            .::|||||..     .|:|.|       |.|||  .|.|..|:|     .:.:|:.|:...|.:.
  Rat   141 QVQPVCLPEASADFHPGMQCW-------VTGWG--YTQEGEPLKPPYNLQEAKVSVVDVETCSQA 196

  Fly   295 YASI--VVLGDSHLCAEGRSRGDSCDGDSGGPLMAFHEGVWVLGGIVSFGLNCGSRFWPAVYTNV 357
            |:|.  .::....|||.|  .||:|..||||||:....|:|...|:||:|..||....|.||..|
  Rat   197 YSSSNGSLIQSDMLCAWG--PGDACQDDSGGPLVCRVAGIWQQAGVVSWGEGCGRPDRPGVYARV 259

  Fly   358 LSYETWITQNI 368
            .:|..||.::|
  Rat   260 TAYVNWIHRHI 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11313NP_651821.3 CLIP 24..78 CDD:463440
Tryp_SPc 116..367 CDD:238113 81/264 (31%)
Tpsg1NP_001426649.1 None
Blue background indicates that the domain is not in the aligned region.

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