DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4H2 and Eif4b

DIOPT Version :10

Sequence 1:NP_651820.1 Gene:eIF4H2 / 43645 FlyBaseID:FBgn0039797 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_663600.2 Gene:Eif4b / 75705 MGIID:95304 Length:611 Species:Mus musculus


Alignment Length:400 Identity:91/400 - (22%)
Similarity:144/400 - (36%) Gaps:126/400 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 RDRDRDRQRQVPTEPPFIAYVGNLPKGLVQGDVMKIFSDFEVKNVRLIKD-RETDEFKGYGYVEF 110
            |:.:.||.| :|..||:.|::||||..:.:..:...|....:..|||.:: ...|..||:||.||
Mouse    81 REPNIDRSR-LPKSPPYTAFLGNLPYDVTEDSIKDFFRGLNISAVRLPREPSNPDRLKGFGYAEF 144

  Fly   111 ETLAQLKSALNCNGRIKLDNFSAPLRIDIADHRRQNPGAPSGVGGAPPAGVGHERGGGVGRGGST 175
            |.|..|.|||:.|.. .|.|  ..:|:|:||                                  
Mouse   145 EDLDSLLSALSLNEE-SLGN--RRIRVDVAD---------------------------------- 172

  Fly   176 GAANGNNPYYQRRNYRRDDSVGSHQFRRREPRSNSSNHQMSNSSPTQSTTSINYNRTTRG--GFN 238
                      |.::..|||    ..|.|...|.:........:.||  |.|.:.....||  .|.
Mouse   173 ----------QAQDKDRDD----RSFGRDRNRDSDKTDTDWRARPT--TDSFDDYPPRRGDDSFG 221

  Fly   239 SRVAVGGNGNRYQGGAPRNFND---REDQQSTGSGGFQRNRTYNFNRSMNNSVGGGGAGVGRGGH 300
            .:.....:.:||:.|....:.|   |:..:..|...:....:.:::|..::.:|.|....|.|..
Mouse   222 DKYRDRYDSDRYRDGYRDGYRDGPRRDMDRYGGRDRYDDRGSRDYDRGYDSRIGSGRRAFGSGYR 286

  Fly   301 PQRNFNGNGGGGGFGVVNGGGNYTNFVQNRNRDRRGHYNPNHSGSSGGYNNNGNNTFGGENNHPV 365
            ...::.|.|                   :|..||              |:...:.::...:::. 
Mouse   287 RDDDYRGGG-------------------DRYEDR--------------YDRRDDRSWSSRDDYS- 317

  Fly   366 HGASESASSGTGPSSSNQFAVRDD---DD-----RPKLVLKPRTVTAPINSLAETKQ---AALIF 419
                                 |||   ||     ||:|.||||:.....::.|.|.|   ||.||
Mouse   318 ---------------------RDDYRRDDRGPPQRPRLNLKPRSAPKEDDASASTSQSSRAASIF 361

  Fly   420 GKAKPRDDSS 429
            |.|||.|.::
Mouse   362 GGAKPVDTAA 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4H2NP_651820.1 RRM_SF 58..144 CDD:473069 32/86 (37%)
Eif4bNP_663600.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..93 5/12 (42%)
RRM_eIF4B 94..175 CDD:409836 32/127 (25%)
PRK12678 <158..>273 CDD:237171 27/167 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..611 55/259 (21%)
PTZ00108 <372..578 CDD:240271 91/399 (23%)

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