DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF4H2 and Rbm34

DIOPT Version :10

Sequence 1:NP_651820.1 Gene:eIF4H2 / 43645 FlyBaseID:FBgn0039797 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_766350.2 Gene:Rbm34 / 52202 MGIID:1098653 Length:442 Species:Mus musculus


Alignment Length:92 Identity:23/92 - (25%)
Similarity:40/92 - (43%) Gaps:18/92 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 YVGNLPKGLVQGDVMKIFSDF-EVKNVRLIKDRETDEFKGYGYVEFETLAQLKSALNCNG----- 124
            :|||||..:....:.:.|.|. .:..||::::..|...:|:|||.||....:..||..|.     
Mouse   294 FVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMG 358

  Fly   125 ------------RIKLDNFSAPLRIDI 139
                        ::|..|.:..|:.|:
Mouse   359 RKLRVMRSVNKEKLKQQNSNPSLKKDV 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4H2NP_651820.1 RRM_SF 58..144 CDD:473069 23/92 (25%)
Rbm34NP_766350.2 RRM1_RBM34 189..280 CDD:409828
RRM2_RBM34 292..364 CDD:409829 19/69 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.