DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4H2 and eif4b

DIOPT Version :10

Sequence 1:NP_651820.1 Gene:eIF4H2 / 43645 FlyBaseID:FBgn0039797 Length:459 Species:Drosophila melanogaster
Sequence 2:XP_012812217.1 Gene:eif4b / 448618 XenbaseID:XB-GENE-988676 Length:614 Species:Xenopus tropicalis


Alignment Length:388 Identity:104/388 - (26%)
Similarity:149/388 - (38%) Gaps:102/388 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 RDRDRDRQRQVPTEPPFIAYVGNLPKGLVQGDVMKIFSDFEVKNVRLIKDRETDE-FKGYGYVEF 110
            |:.:.||.| :|..|||.|::||||..:.:..:.|.|....:..|||.::....| .||:||.||
 Frog    95 REPNVDRSR-LPKSPPFTAFLGNLPYDVTEESIQKFFRGLNISAVRLPREPSNPERLKGFGYAEF 158

  Fly   111 ETLAQLKSALNCNGRIKLDNFSAPLRIDIADHRRQNPGAPSGVGGAPPAGVGHERGGGVGRGGST 175
            :.|..|..||:.|.. .|.|  ..:|:||||..:...              ..||..|..|.   
 Frog   159 DDLDSLLRALSLNEE-SLGN--RRIRVDIADQAQDKD--------------RDERSFGRDRD--- 203

  Fly   176 GAANGNNPYYQRRNYRRDDSVGSHQFRRREPRSNSSNHQMSNSSPTQSTTSINYNRTTRGGFNSR 240
                        || |..|...|..:|.|....:..::.......:|.      :|.....:.| 
 Frog   204 ------------RN-RESDKTDSSDWRARPSTDSFDDYPPRRGDDSQG------DRYRSDRYES- 248

  Fly   241 VAVGGNGNRYQGGAPRNFNDREDQQSTGSGGFQRNRTYNFNRSMNNSVGGGGAGVGRGGHPQRNF 305
                   :||:.| ||...||.::.........|||: :::|..::.  ||....|.|.....::
 Frog   249 -------DRYRDG-PRRDGDRYERDRGRDRYDDRNRS-DYDRGYDSR--GGRRAFGSGYRRDDDY 302

  Fly   306 NGNGGGGGFGVVNGGGNYTNFVQNRNRDRRGHYNPNHSGSSGGYNNNGNNTFGGENNHPVHGASE 370
            .|.||        ||..|.:..:.|..||...:|        ||:.|                .|
 Frog   303 RGGGG--------GGDRYGDRYEERREDRSDRWN--------GYSRN----------------EE 335

  Fly   371 SASSGTGPSSSNQFAVRDDDDRPKLVLKPRTVTAPINS----LAETKQAALIFGKAKPRDDSS 429
            ......||:           .||||.||||  |||.:.    .|.|.:||.|||.|||.|.::
 Frog   336 RREERAGPT-----------QRPKLNLKPR--TAPKDEEGGPSAATSRAASIFGGAKPVDTAA 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4H2NP_651820.1 RRM_SF 58..144 CDD:473069 33/86 (38%)
eif4bXP_012812217.1 RRM_eIF4B 108..189 CDD:409836 32/83 (39%)

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