DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF4H2 and CG11726

DIOPT Version :10

Sequence 1:NP_651820.1 Gene:eIF4H2 / 43645 FlyBaseID:FBgn0039797 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_648461.1 Gene:CG11726 / 39275 FlyBaseID:FBgn0036156 Length:291 Species:Drosophila melanogaster


Alignment Length:106 Identity:31/106 - (29%)
Similarity:52/106 - (49%) Gaps:16/106 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DNRE--------NRSNFQNYRNRDRDRDRQRQVPTEPPFIAYVGNLPKGLVQGDVMKIFSDFEVK 89
            ||.|        .:|| .:.:.:....|.:.:|..||||:|.|.|||....:|::.|:|:.|.::
  Fly    48 DNAELFMYGDGPKKSN-SDLQKKVSTPDPEEEVSMEPPFVALVSNLPMECTEGELRKVFTSFSIR 111

  Fly    90 NVRLIKDRETDEFKGYGYVEFETLAQL-----KSALNCNGR 125
            ::.:.|..:..  ||:.|||.::...|     ...|.|.||
  Fly   112 SLTIPKKGKRP--KGFAYVEMDSREDLVRLLKMDKLKCRGR 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4H2NP_651820.1 RRM_SF 58..144 CDD:473069 24/73 (33%)
CG11726NP_648461.1 RRM_SF 83..150 CDD:473069 21/68 (31%)

Return to query results.
Submit another query.