DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4H2 and Rbmx2

DIOPT Version :10

Sequence 1:NP_651820.1 Gene:eIF4H2 / 43645 FlyBaseID:FBgn0039797 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_001107258.2 Gene:Rbmx2 / 367930 RGDID:1562693 Length:328 Species:Rattus norvegicus


Alignment Length:326 Identity:57/326 - (17%)
Similarity:118/326 - (36%) Gaps:65/326 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 YVGNLPKGLVQGDVMKIFSDF-EVKNVRLIKDRETDEFKGYGYVEFETLAQLKSAL-NCNG---- 124
            ::|.||..|.:||::.:||.: |:.|:.|::|::|.:.||:.::.:|.......|: |.||    
  Rat    39 FLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIK 103

  Fly   125 --RIKLD---NFSAPLR---IDIADHRRQNPGAPSGVGGAPPAGVGHERGGGVGRGGSTGAANGN 181
              .|::|   |:.||..   :|......|..|..:....:.|..|..:....|.:          
  Rat   104 GRTIRVDHVANYRAPQESEDVDDVTRELQEKGCGAKTPPSSPPEVSEDEDAKVTK---------- 158

  Fly   182 NPYYQRRNYRRD--------------DSVGSHQFRRREPRSNSSNHQMSNSSPTQSTTSINYNRT 232
            .|...::..::.              .|....:..:.....::..|....|...|.:......::
  Rat   159 KPKKDKKEKKKKKEKEKTERPVQAELPSCSRSKTVKETDEQSAKKHSSKPSERAQKSECRERKKS 223

  Fly   233 TRGGFNSRVAVGGNGNRYQGGAPRNFNDREDQQSTGSGGFQRNRTYNFNRSMNNSVGGGGAGVGR 297
            ..|..:.|.:..|.....:..|.:..:..|.:.|:...|.:::|..:..||             .
  Rat   224 HSGSPDGRTSCRGRAEEPEWEAKKEKHKHEHKPSSRREGEEKSRDKDRGRS-------------S 275

  Fly   298 GGHPQRNFNGNGGGGGFGVVNGGGNYTNFVQNRNRDRRGHYNPNHSGSSGGYNNNGNNTFGGENN 362
            |.|..|: :|:..|...             ::|:|.|....:.:|......|::...:....:..
  Rat   276 GTHSSRH-HGHSEGRSH-------------RSRSRSRSRSPDRSHRHKKHRYSHERESFHASDRR 326

  Fly   363 H 363
            |
  Rat   327 H 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4H2NP_651820.1 RRM_SF 58..144 CDD:473069 26/91 (29%)
Rbmx2NP_001107258.2 RRM_ist3_like 27..115 CDD:409845 22/75 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 118..328 33/247 (13%)

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