DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF4H2 and EEED8.4

DIOPT Version :10

Sequence 1:NP_651820.1 Gene:eIF4H2 / 43645 FlyBaseID:FBgn0039797 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_495022.2 Gene:EEED8.4 / 173921 WormBaseID:WBGene00017135 Length:191 Species:Caenorhabditis elegans


Alignment Length:155 Identity:38/155 - (24%)
Similarity:63/155 - (40%) Gaps:32/155 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 DRQRQVPTEPPFIAYVGNLPKGLVQGDVMKIFSDF-EVKNVRLIKDRETDEFKGYGYVEFETLAQ 115
            :.|:.:..:..||   ||:.......::.:.|... ::....:.||:.|.:.|.:.|:||:..:.
 Worm    47 EEQKAIDAKSVFI---GNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSS 108

  Fly   116 LKSALNCNGRIKLDNF-SAPLRIDIADHRRQN-PGAPSGVGGAPPAGVGHERG------------ 166
            :::||..||.:    | |.|:   :...:|.| ||...||.|:.....|..||            
 Worm   109 IENALVMNGSL----FRSRPI---VVTAKRTNIPGMGHGVRGSSRGTFGRGRGAARGAPGRQQTV 166

  Fly   167 -------GGVGRGGSTGAANGNNPY 184
                   .|..|||..|.....|||
 Worm   167 VVKYVYVNGPNRGGRGGRGRRFNPY 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4H2NP_651820.1 RRM_SF 58..144 CDD:473069 19/87 (22%)
EEED8.4NP_495022.2 RRM_II_PABPs 56..128 CDD:409747 19/81 (23%)

Return to query results.
Submit another query.