DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C2 and AT2G20050

DIOPT Version :9

Sequence 1:NP_733397.2 Gene:Pka-C2 / 43644 FlyBaseID:FBgn0000274 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_179595.5 Gene:AT2G20050 / 816524 AraportID:AT2G20050 Length:1094 Species:Arabidopsis thaliana


Alignment Length:297 Identity:93/297 - (31%)
Similarity:139/297 - (46%) Gaps:36/297 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LVREKSGKNYYAAKMMSKEDLVRLKQVAHVHNEKHVLNAARFPFLIYLVDSTKCFDYLYLILPLV 125
            ||..|..:|..:.|..||:.:.:|.:.|.|..|::::.....|..|.......|.|..:..: |:
plant   798 LVHLKDKENLLSLKRFSKQKVKKLGKEAQVLKERNLMKNVIKPSAIVPEILCTCVDQTFAAI-LL 861

  Fly   126 N-------GGELFSYHRRVRKFNEKHARFYAAQVALALEYMHKMHLMYRDLKPENILLDQRGYIK 183
            |       ...|.|      ..:|...||....:..|:|.:||..:::|...||.::|||.||::
plant   862 NTTLACPISSLLHS------PLDESSVRFITGSLVSAIEDIHKNEILFRGSSPELLMLDQSGYLQ 920

  Fly   184 ITDFGFTKRVDG-RTSTLCGTPEYLAPEIVQLRPYNKSVDWWAFGILVYEFVAGRSPFAIHNRDV 247
            |.||.|.|::.| ||.|:||..:||||||||.:.:..:.||||.|:|:|..:.|..||.......
plant   921 IVDFRFAKKLSGERTFTICGNADYLAPEIVQGKGHGYAADWWALGVLIYYMLEGEMPFGSWRESE 985

  Fly   248 ILMYSKICICDYKMPSYFTSQLRSLVESLMQVDTSKRLGNSNDGSSDVKSHPWFQGVDWFGILNQ 312
            :..:.||.......|...:|:...|:..|::||.:.|.| |..|...:|.||||.|:.|..|.|:
plant   986 LDTFQKIAKGQLTFPRVLSSEAEDLITKLLEVDENLRFG-SQGGPESIKKHPWFNGLKWEAISNR 1049

  Fly   313 EVTAPYQPTISGAEDLSNFENFEFKDRYKSRINRHPE 349
            |...| |..|                   |||:.|.|
plant  1050 EFQVP-QEII-------------------SRIHHHLE 1066

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C2NP_733397.2 PKc_like 43..334 CDD:328722 88/280 (31%)
AT2G20050NP_179595.5 PP2Cc 123..397 CDD:238083
CAP_ED 491..600 CDD:237999
CAP_ED 617..>714 CDD:237999
PKc_like 797..1054 CDD:419665 85/263 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0616
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
32.860

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