DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C2 and Rps6ka3

DIOPT Version :10

Sequence 1:NP_733397.2 Gene:Pka-C2 / 43644 FlyBaseID:FBgn0000274 Length:354 Species:Drosophila melanogaster
Sequence 2:XP_017457618.1 Gene:Rps6ka3 / 501560 RGDID:1563860 Length:759 Species:Rattus norvegicus


Alignment Length:325 Identity:116/325 - (35%)
Similarity:182/325 - (56%) Gaps:32/325 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 VLGNGSFGTVMLVREKSG---KNYYAAKMMSK-----EDLVRLKQVAHVHNEKHVLNAARFPFLI 106
            |||.||||.|.||::.||   :..||.|::.|     .|.||.|.      |:.:|.....||::
  Rat    92 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM------ERDILVEVNHPFIV 150

  Fly   107 YLVDSTKCFDYLYLILPLVNGGELFSYHRRVRKFNEKHARFYAAQVALALEYMHKMHLMYRDLKP 171
            .|..:.:....|||||..:.||:||:...:...|.|:..:||.|::||||:::|.:.::||||||
  Rat   151 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKP 215

  Fly   172 ENILLDQRGYIKITDFGFTKRV---DGRTSTLCGTPEYLAPEIVQLRPYNKSVDWWAFGILVYEF 233
            ||||||:.|:||:||||.:|..   :.:..:.|||.||:|||:|..|.:.:|.|||:||:|::|.
  Rat   216 ENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 280

  Fly   234 VAGRSPFAIHNRD---VILMYSKICICDYKMPSYFTSQLRSLVESLMQVDTSKRLGNSNDGSSDV 295
            :.|..||...:|.   .:::.:|:     .||.:.:.:.:||:..|.:.:.:.|||...||..::
  Rat   281 LTGTLPFQGKDRKETMTMILKAKL-----GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEI 340

  Fly   296 KSHPWFQGVDWFGILNQEVTAPYQPTISGAEDLSNFE-NFEFKDRYKS-----RINRHPELFANF 354
            |.|.:|..:||..:..:|:..|::|.....||...|: .|..|....|     ..|.| :||..|
  Rat   341 KRHSFFSTIDWNKLYRREIHPPFKPATGRPEDTFYFDPEFTAKTPKDSPGIPPSANAH-QLFRGF 404

  Fly   355  354
              Rat   405  404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C2NP_733397.2 Protein Kinases, catalytic domain 43..334 CDD:473864 108/298 (36%)
Rps6ka3XP_017457618.1 STKc_RSK_N 91..407 CDD:270734 116/325 (36%)
STKc_RSK2_C 421..759 CDD:271078
Blue background indicates that the domain is not in the aligned region.

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