DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pka-C2 and prkg1a

DIOPT Version :9

Sequence 1:NP_733397.2 Gene:Pka-C2 / 43644 FlyBaseID:FBgn0000274 Length:354 Species:Drosophila melanogaster
Sequence 2:XP_005157115.1 Gene:prkg1a / 394005 ZFINID:ZDB-GENE-040426-1308 Length:684 Species:Danio rerio


Alignment Length:327 Identity:114/327 - (34%)
Similarity:186/327 - (56%) Gaps:14/327 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LDNMS----REFEERWNHQTQSPY---TNLENYITRAVLGNGSFGTVMLVREKSGK-NYYAAKMM 76
            |:::|    .:.|.:..::.::.:   .||.::.....||.|.||.|.||:.||.: ..:|.|::
Zfish   341 LEDVSNKGCEDAEAKAKYEAENAFFSNLNLSDFNIIDTLGVGGFGRVELVQLKSDEMKTFAMKIL 405

  Fly    77 SKEDLVRLKQVAHVHNEKHVLNAARFPFLIYLVDSTKCFDYLYLILPLVNGGELFSYHRRVRKFN 141
            .|..:|..:|..|:.:||.::..|...|::.|..:.|...|||:::....||||::..|....|:
Zfish   406 KKRHIVDTRQQEHIRSEKLIMQEAHSDFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGNFD 470

  Fly   142 EKHARFYAAQVALALEYMHKMHLMYRDLKPENILLDQRGYIKITDFGFTKRV--DGRTSTLCGTP 204
            :...|||.|.|..|..|:|...::||||||||::||.|||.|:.||||.|::  ..:|.|.||||
Zfish   471 DSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYAKLVDFGFAKKIGFGKKTWTFCGTP 535

  Fly   205 EYLAPEIVQLRPYNKSVDWWAFGILVYEFVAGRSPFAIHNRDVILMYSKIC--ICDYKMPSYFTS 267
            ||:||||:..:.::.|.|:|:.|||:||.:.|..||:  ..|.:..|:.|.  |...:.|...|.
Zfish   536 EYVAPEIILNKGHDISADYWSLGILMYELLTGSPPFS--GPDPMKTYNIILRGIDMIEFPKKITK 598

  Fly   268 QLRSLVESLMQVDTSKRLGNSNDGSSDVKSHPWFQGVDWFGILNQEVTAPYQPTISGAEDLSNFE 332
            ...:|::.|.:...|:||||..:|..|::.|.||:|.:|.|:....:..|..|.::.:.|.|||:
Zfish   599 NAANLIKKLCRDTPSERLGNLKNGVKDIQKHKWFEGFNWDGLRKGTLMPPIIPNVTSSTDTSNFD 663

  Fly   333 NF 334
            :|
Zfish   664 SF 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C2NP_733397.2 PKc_like 43..334 CDD:328722 108/295 (37%)
prkg1aXP_005157115.1 DD_cGKI-beta 6..57 CDD:213375
Crp 114..>264 CDD:223736
CAP_ED 116..225 CDD:237999
Crp 228..>332 CDD:223736
CAP_ED 235..339 CDD:237999
PTZ00263 355..674 CDD:140289 111/313 (35%)
STKc_cGK 379..639 CDD:270724 101/261 (39%)
S_TK_X 634..>677 CDD:214529 10/32 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575730
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.