DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C2 and CG4839

DIOPT Version :10

Sequence 1:NP_733397.2 Gene:Pka-C2 / 43644 FlyBaseID:FBgn0000274 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_609349.1 Gene:CG4839 / 34348 FlyBaseID:FBgn0032187 Length:1003 Species:Drosophila melanogaster


Alignment Length:313 Identity:114/313 - (36%)
Similarity:181/313 - (57%) Gaps:15/313 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SREFEERWNHQTQSPYTNLENYITRAVLGNGSFGTVMLVREKSGKNYYAAKMMSKEDLVRLKQVA 88
            |.||:   |..:|...:.|:..   |.||.|:||.|.||  ...:...|.|::.|.::|:..|:.
  Fly   679 SLEFD---NEYSQVAISELKKI---ATLGCGAFGRVDLV--AYNQQALALKIIKKIEVVKQDQIE 735

  Fly    89 HVHNEKHVLNAAR-FPFLIYLVDSTKCFDYLYLILPLVNGGELFSYHRRVRKFNEKHARFYAAQV 152
            ||:|||:|:...| .||::.|..:.:...|:|.::....||::::...:.:.|:||.|:|.|..|
  Fly   736 HVYNEKNVMIKCRQSPFIVQLYRTYRNDKYVYFLMEACMGGDVWTVMSKRQYFDEKTAKFIAGCV 800

  Fly   153 ALALEYMHKMHLMYRDLKPENILLDQRGYIKITDFGFTK--RVDGRTSTLCGTPEYLAPEIVQLR 215
            ..|.:|:|..|.:||||||||::|...||.|:.||||.|  |.:.:|:|..|||||:||||:..|
  Fly   801 VEAFDYLHSHHFIYRDLKPENLMLGTDGYCKLVDFGFAKFVRQNEKTNTFAGTPEYVAPEIILDR 865

  Fly   216 PYNKSVDWWAFGILVYEFVAGRSPFAIHNRDVILMYSKIC--ICDYKMPSYFTSQLRSLVESLMQ 278
            .::::||:||.||||||.:.|::||...|:  |.:|.:|.  |....|||......:.||..|.:
  Fly   866 GHDRAVDYWALGILVYELLVGKTPFRGVNQ--IKIYQQILSGIDVIHMPSRIPKSAQHLVRHLCK 928

  Fly   279 VDTSKRLGNSNDGSSDVKSHPWFQGVDWFGILNQEVTAPYQPTISGAEDLSNF 331
            ...::|||....|.:|:|.|.||:.:||..:..:::.:|.:..:....||..|
  Fly   929 QLPAERLGYQRKGIADIKRHSWFESLDWQRLKLKQLPSPIKRPLKSWTDLQYF 981

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C2NP_733397.2 Protein Kinases, catalytic domain 43..334 CDD:473864 108/294 (37%)
CG4839NP_609349.1 CAP_ED 431..539 CDD:237999
CAP_ED 550..663 CDD:237999
STKc_cGK 700..957 CDD:270724 102/260 (39%)
Blue background indicates that the domain is not in the aligned region.

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