DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C2 and Rps6kl1

DIOPT Version :10

Sequence 1:NP_733397.2 Gene:Pka-C2 / 43644 FlyBaseID:FBgn0000274 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001358307.1 Gene:Rps6kl1 / 299202 RGDID:1309493 Length:545 Species:Rattus norvegicus


Alignment Length:173 Identity:56/173 - (32%)
Similarity:91/173 - (52%) Gaps:21/173 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 EKHARFYAAQVALALEYMHKMHLMYRDLKPENILLDQ-RGYIKITDFGFTKRVDGRTSTLCGTPE 205
            |...:.:||::.||||.:|:..::.|||.|:|:|||| .|:|::|.||....|:.:.|.......
  Rat   381 EGQVKQWAAEMLLALEALHEQGVLCRDLNPQNLLLDQAEGHIQLTYFGQWSEVEPQCSQEAVDCL 445

  Fly   206 YLAPEIVQLRPYNKSVDWWAFGILVYEFVAGR-------SPFAIHNRDVILMYSKICICDYKMPS 263
            |.|||:..:....::.|||::|.|:||.:.|.       |.|..|.:             .::|.
  Rat   446 YSAPEVGGISELTEACDWWSYGSLLYELLTGMALSQSHPSGFQAHTQ-------------LQLPE 497

  Fly   264 YFTSQLRSLVESLMQVDTSKRLGNSNDGSSDVKSHPWFQGVDW 306
            :.:....||:..|:|.|..:|||....|:|.:||||:|..:.|
  Rat   498 WLSRPAASLLTELLQFDPQRRLGAGGGGTSKLKSHPFFSSIQW 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C2NP_733397.2 Protein Kinases, catalytic domain 43..334 CDD:473864 56/173 (32%)
Rps6kl1NP_001358307.1 MIT_SNX15 48..122 CDD:239140
STKc_RPK118_like 148..535 CDD:270728 54/166 (33%)
Blue background indicates that the domain is not in the aligned region.

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