DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12069 and Prkcq

DIOPT Version :10

Sequence 1:NP_651819.1 Gene:CG12069 / 43643 FlyBaseID:FBgn0039796 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001263650.1 Gene:Prkcq / 85420 RGDID:620968 Length:707 Species:Rattus norvegicus


Alignment Length:321 Identity:110/321 - (34%)
Similarity:181/321 - (56%) Gaps:23/321 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PSPSTGL-----------DDYEIKATLGSGSFGKVQLVRERESGVYYASKQLSKDQIVKTKQVSH 91
            |.|...|           ||:.:...||.||||||.|...:.:..::|.|.|.||.::....|..
  Rat   360 PEPEVNLQRASLQLKLKIDDFILHKMLGKGSFGKVFLAEFKRTKQFFAIKALKKDVVLMDDDVEC 424

  Fly    92 VMSEKNVLR-SMTFPNTVNLIASYKDFDSLYLVLPLIGGGELFTYHRKVRKFTEKQARFYAAQVF 155
            .|.||.||. :...|...::..:::..::|:.|:..:.||:|..:.:...||...:|.||||::.
  Rat   425 TMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEII 489

  Fly   156 LALEYLHHCSLLYRDLKPENIMMDKNGYLKVTDFGFAKK---VETRTMTLCGTPEYLPPEIIQSK 217
            |.|::||...::|||||.:||::|::|::|:.|||..|:   .:.:|.|.||||:|:.|||:..:
  Rat   490 LGLQFLHSKGIVYRDLKLDNILLDRDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQ 554

  Fly   218 PYGTSVDWWAFGVLVFEFVAGHSPFSAHNRDVMSMYNKICEADYKMPSYFSGALRHLVDHLLQVD 282
            .|..|||||:||||::|.:.|.|||  |.:|...:::.|...:...|.:.....:.|:..|...:
  Rat   555 KYNHSVDWWSFGVLLYEMLIGQSPF--HGQDEEELFHSIRMDNPFYPRWLEREAKDLLVKLFVRE 617

  Fly   283 LSKRFGNLINGNRDIKEHEWFKDVEWIPLLNQTVNAPYVPNISNPEDISNFDK--VSDKPR 341
            ..||.|  :.|  ||::|..|:::.|..|..:.::.|:.|.:.:|.|.|||||  :|:|||
  Rat   618 PEKRLG--VRG--DIRQHPLFREINWEELERKEIDPPFRPKVKSPYDCSNFDKEFLSEKPR 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12069NP_651819.1 Protein Kinases, catalytic domain 45..335 CDD:473864 101/293 (34%)
PrkcqNP_001263650.1 C1_nPKC_theta-like_rpt1 153..213 CDD:410384
C1_nPKC_theta-like_rpt2 232..281 CDD:410387
STKc_nPKC_theta 374..704 CDD:270770 107/307 (35%)
Blue background indicates that the domain is not in the aligned region.

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