DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12069 and aPKC

DIOPT Version :10

Sequence 1:NP_651819.1 Gene:CG12069 / 43643 FlyBaseID:FBgn0039796 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster


Alignment Length:310 Identity:103/310 - (33%)
Similarity:174/310 - (56%) Gaps:16/310 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PST----GLDDYEIKATLGSGSFGKVQLVRERESGVYYASKQLSKDQIVKTKQVSHVMSEKNVLR 100
            |.|    .|:|:|:...:|.||:.||.:|..|.:...||.|.:.|..:...:.:..|.:||:|..
  Fly   605 PGTQRQYSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFE 669

  Fly   101 SMT-FPNTVNLIASYKDFDSLYLVLPLIGGGELFTYHRKVRKFTEKQARFYAAQVFLALEYLHHC 164
            :.: .|..|.|.:.::....|:.|:..:.||:|..:.::.|:..|:.||||||::.|||.:||..
  Fly   670 TASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHEK 734

  Fly   165 SLLYRDLKPENIMMDKNGYLKVTDFGFAK---KVETRTMTLCGTPEYLPPEIIQSKPYGTSVDWW 226
            .::|||||.:|:::|..|::|:||:|..|   :....|.|.||||.|:.|||::.:.||.|||||
  Fly   735 GIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWW 799

  Fly   227 AFGVLVFEFVAGHSPF----SAHNRDVMS---MYNKICEADYKMPSYFSGALRHLVDHLLQVDLS 284
            |.|||::|.:||.|||    ::.|.|..:   ::..|.|...::|...|.....::...|..:.:
  Fly   800 ALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRSLSVRAASVLKGFLNKNPA 864

  Fly   285 KRFG-NLINGNRDIKEHEWFKDVEWIPLLNQTVNAPYVPNISNPEDISNF 333
            .|.| :..:...||..|.:||:::|..|..:.|..|:.|.:.:..|::||
  Fly   865 DRLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKPRLDSDRDLANF 914

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12069NP_651819.1 Protein Kinases, catalytic domain 45..335 CDD:473864 100/301 (33%)
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 98/295 (33%)
Blue background indicates that the domain is not in the aligned region.

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