DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12069 and Pkcdelta

DIOPT Version :10

Sequence 1:NP_651819.1 Gene:CG12069 / 43643 FlyBaseID:FBgn0039796 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster


Alignment Length:315 Identity:106/315 - (33%)
Similarity:179/315 - (56%) Gaps:14/315 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SPST--------GLDDYEIKATLGSGSFGKVQLVRERESGVYYASKQLSKDQIVKTKQVSHVMSE 95
            :|:|        .:||:...|.||.||||||.|...|::..|||.|.|.||.:::...|...:.|
  Fly  1550 APATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIE 1614

  Fly    96 KNVLRSMT-FPNTVNLIASYKDFDSLYLVLPLIGGGELFTYHRKVRKFTEKQARFYAAQVFLALE 159
            :.||...| .|...:|..:::....|:.|:..:.||:|..:.::..:|:|::||||.|::...|:
  Fly  1615 RKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLK 1679

  Fly   160 YLHHCSLLYRDLKPENIMMDKNGYLKVTDFGFAK---KVETRTMTLCGTPEYLPPEIIQSKPYGT 221
            :||...::|||||.:|:::|..|::::.|||..|   .::....:.||||:|:.||||:.:.|..
  Fly  1680 FLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQ 1744

  Fly   222 SVDWWAFGVLVFEFVAGHSPFSAHNRDVMSMYNKICEADYKMPSYFSGALRHLVDHLLQVDLSKR 286
            :||||:||||::|.:.|.||||..:.|  .::..||......|.|.|.....::..||:.|.:||
  Fly  1745 NVDWWSFGVLLYEMLIGQSPFSGCDED--ELFWSICNEIPWFPVYISAEATGILKGLLEKDYTKR 1807

  Fly   287 FGNLINGNRDIKEHEWFKDVEWIPLLNQTVNAPYVPNISNPEDISNFDKVSDKPR 341
            .|:..:...||.:|.:|:.::|..|..:.:..|:.|.:.:|.|...||:|..:.|
  Fly  1808 IGSQYSPAGDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRER 1862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12069NP_651819.1 Protein Kinases, catalytic domain 45..335 CDD:473864 101/293 (34%)
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 102/295 (35%)
Blue background indicates that the domain is not in the aligned region.

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