DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12069 and pkc-3

DIOPT Version :10

Sequence 1:NP_651819.1 Gene:CG12069 / 43643 FlyBaseID:FBgn0039796 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_495011.1 Gene:pkc-3 / 173914 WormBaseID:WBGene00004034 Length:597 Species:Caenorhabditis elegans


Alignment Length:313 Identity:104/313 - (33%)
Similarity:173/313 - (55%) Gaps:24/313 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 STGLDDYEIKATLGSGSFGKVQLVRERESGVYYASKQLSKDQIVKTKQVSHVMSEKNVLRSMT-F 104
            :..|:|:.:...:|.||:.||.......:...||.|.:.|:...:.:.:..|.:||:|..:.: :
 Worm   247 AVSLNDFRLLTVIGRGSYAKVVQAEHVSTRQIYAIKIIKKEMFNEDEDIDWVQTEKSVFEAASNY 311

  Fly   105 PNTVNLIASYKDFDSLYLVLPLIGGGELFTYHRKVRKFTEKQARFYAAQVFLALEYLHHCSLLYR 169
            |..|.|.:.::....|:.|:..:.||:|..:.::.||..|:.||||:.::.|||.:||...::||
 Worm   312 PFLVGLHSCFQTESRLFFVIEFVPGGDLMFHMQQQRKLPEEHARFYSGEIILALHFLHSRGIIYR 376

  Fly   170 DLKPENIMMDKNGYLKVTDFGFAK---KVETRTMTLCGTPEYLPPEIIQSKPYGTSVDWWAFGVL 231
            |||.:|:::|..|::|:||:|..|   |....|.|.||||.|:.|||::...||.||||||.|||
 Worm   377 DLKLDNVLIDAEGHIKLTDYGMCKENIKDGDLTSTFCGTPNYIAPEILRGDEYGFSVDWWALGVL 441

  Fly   232 VFEFVAGHSPFSAHNRDVMSMYNK-----------ICEADYKMPSYFSGALRHLVDHLLQVDLSK 285
            :||.:||.|||     |::.|.|.           |.|...::|...|.....::...|..|.::
 Worm   442 MFEMMAGRSPF-----DIVGMQNSEENTEDYLFQIILERQIRIPRSLSVRASGILKGFLNKDPTE 501

  Fly   286 RFG---NLINGNRDIKEHEWFKD-VEWIPLLNQTVNAPYVPNISNPEDISNFD 334
            |.|   ::..|.||:|||::|:. ::|..|..:.|..||.|.:.:..|:::||
 Worm   502 RLGCKLDINEGLRDMKEHQFFRGFIDWEALEQKAVAPPYHPAVESDRDLTHFD 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12069NP_651819.1 Protein Kinases, catalytic domain 45..335 CDD:473864 103/309 (33%)
pkc-3NP_495011.1 PB1_aPKC 13..95 CDD:99725
C1_aPKC 126..180 CDD:410344
STKc_aPKC 257..586 CDD:270740 102/303 (34%)
Blue background indicates that the domain is not in the aligned region.

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