DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn100A and Spn55B

DIOPT Version :10

Sequence 1:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster


Alignment Length:361 Identity:87/361 - (24%)
Similarity:163/361 - (45%) Gaps:54/361 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 SELESQPEETTTLSVEKQEKPDMAAE-ENPAEKQQNKRSDQEESQIKNLEENETVQEEEKLAKIM 319
            |:.|:..|....|.......|::|.. :...||.:|       |.:..:.....|||.::|    
  Fly    50 SQGETADEIAKALHFVSNFPPEVAQTFQFVLEKYRN-------SNLLRVANKLYVQEGKQL---- 103

  Fly   320 AAPALTAGEPEKVRLPLQKLENAVKTAAKDGADEIMLALESHLPSVSRVNGARSLFQQDDITSAL 384
             .||               .::|:|......|:.|..||..  .:...:|...:...|..||..:
  Fly   104 -KPA---------------YQSAIKEQYHSEAESINFALND--AAAQAINAWVNAKTQGKITELV 150

  Fly   385 SANSITGRSAGSKSKMLLFNGLYYRGSWANPFYQLRDGSDEFFFMTNEDAVKAPMMHARGKFQVA 449
            ||:|.:     ..::::|.|.|:::||||:.|.:.|. .::.|::..|:.||...|:.:.||...
  Fly   151 SADSFS-----DNTRLVLLNALHFKGSWAHKFSEERT-EEDIFWVGEEEQVKINYMNQKAKFNYG 209

  Fly   450 DLPQVKARVLSLPYETSRYALCIVLPDETEGLSDVISQLQTSDFLLAKKQFQMKELHISMPKFQV 514
            ....:....|.:||:.|..::.::||.|..|:..:..:|:|.:.:....:..::|:|:..|||:|
  Fly   210 FFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVEEVHVKFPKFKV 274

  Fly   515 EETSRSEAMLKQMGLKKVFSRTEAQLSLLSEDPD-VHVDEIVQFVNVRVDEGGSSANSLSAATMQ 578
            :.:......|||:|:.|:|: .:|:.|.|.|.|: |.|.:::....:.|:|.|:.|.:.:...|.
  Fly   275 DYSLELAEKLKQLGITKMFT-DQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAATGMIMM 338

  Fly   579 ARTPSVESTVLPVPEPEPELPGVERFEVNRPFAYFI 614
            .|     ....|:           :|:.:|||.|.|
  Fly   339 TR-----MMTFPL-----------QFQADRPFLYVI 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn100ANP_651818.1 serpin 41..>146 CDD:476815
serpin <380..627 CDD:381000 63/236 (27%)
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 87/361 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.