DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn100A and Serpinb1c

DIOPT Version :10

Sequence 1:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_006516771.1 Gene:Serpinb1c / 380839 MGIID:2445363 Length:408 Species:Mus musculus


Alignment Length:240 Identity:67/240 - (27%)
Similarity:121/240 - (50%) Gaps:23/240 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 SKSKMLLFNGLYYRGSWANPFYQLRDGSDEFFFMTNEDAVKAPMMHARGKFQVADLPQVKARVLS 460
            |.:|::|.|..|::|.|...| ..||.:|..|.::.:......||:.:.......:|.:|.:||.
Mouse   188 SMTKLVLVNATYFKGMWQKKF-MARDTTDAPFRLSKKVTKTVKMMYLKNNLPFGYIPDLKCKVLE 251

  Fly   461 LPYETSRYALCIVLP----DETEGLSDVISQLQTSDFLLAKKQFQMKELHISMPKFQVEETSRSE 521
            :||:....::.|:||    |||.||.::..|| |.:.|...:..|..::.:.:|||::||:....
Mouse   252 MPYQGGELSMVILLPEDIEDETTGLEEIEKQL-TLEKLQECENLQNIDVCVKLPKFKMEESYILN 315

  Fly   522 AMLKQMGLKKVFSRTEAQLSLLSEDPDVHVDEIVQFVNVRVDEGGSSANSLSAATMQARTPSVES 586
            :.|.|:|::.:||.::|.||.:|...|:.:.:||....|.|:|.|:..::....|:      |..
Mouse   316 SNLGQLGVQDLFSSSKADLSGMSGSRDLFISKIVHKSYVEVNEEGTETDAAMPGTV------VGC 374

  Fly   587 TVLPVPEPEPELPGVERFEVNRPFAYFIVDCQEQFVLASGKIYTP 631
            .::|:           .|.|:.||.:||.......||..|::.:|
Mouse   375 CLMPM-----------EFTVDHPFLFFIRHNPTAHVLFLGRVCSP 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn100ANP_651818.1 serpin 41..>146 CDD:476815
serpin <380..627 CDD:381000 65/234 (28%)
Serpinb1cXP_006516771.1 serpinB1_LEI 34..408 CDD:381028 66/238 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.