DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn100A and Serpina11

DIOPT Version :10

Sequence 1:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001008776.1 Gene:Serpina11 / 362774 RGDID:1359239 Length:462 Species:Rattus norvegicus


Alignment Length:399 Identity:88/399 - (22%)
Similarity:147/399 - (36%) Gaps:101/399 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 LAKIMAAPALTAGEPEKVRLPLQKLE-NAVKTAAKD---GADEIMLALESHLPSVSRVNGARSLF 375
            |:..:|..:|.|....:.:: ||.|. |..:|.|.|   |...::..|:...|.:....| .|||
  Rat    80 LSSTVALLSLGAHADTQAQI-LQSLGFNLTETPAADIHRGFQSLLHTLDLPSPKLELKLG-HSLF 142

  Fly   376 -------QQDDITS--------ALSANSITGRSAGSK-----------------------SKMLL 402
                   ||..:.|        |.|||.....:.|.:                       :.|:|
  Rat   143 LDRQLKPQQRFLDSAKELYGALAFSANFTEAAATGQQINDLVRKQTYGQVVGCLPEFDRDTLMVL 207

  Fly   403 FNGLYYRGSWANPFYQLRDGSDEFFFMTNEDAVKAPMMHARGKFQVADLPQVKARVLSLPYETSR 467
            .|.::::..|.:||.:.:....|.||:.....::.|||..:...:.....:....||.:.| :..
  Rat   208 LNYIFFKAKWKHPFDRYQTRKQESFFVDQRLQLRIPMMRQKEMHRFLYDQEASCTVLQIEY-SGT 271

  Fly   468 YALCIVLPDETEGLSDVISQLQTSD-------FL-----------------------------LA 496
            ..|.:||||..: :..|.:.||...       ||                             |:
  Rat   272 ALLLLVLPDPGK-MQQVEAALQPETLRRWGQRFLPRKAQAGGAGNGGLHWDRVNEFPQNRVGKLS 335

  Fly   497 KKQFQMKE----LHISMPKFQVEETSRSEAMLKQMGLKKVFSRTEAQLSLLSEDPDVHVDEIVQF 557
            .|..||.:    |.:.:|:|.|..|...|.:|..:||..:|. .||.||.:....:..|..:...
  Rat   336 LKHLQMTQTWSLLDLHLPRFSVSATYNLEEILPLVGLSSLFD-VEADLSGIMGQLNKTVSRVSHK 399

  Fly   558 VNVRVDEGGSSANSLSAATMQARTPSVESTVLPVPEPEPELPGVERFEVNRPFAYFIVDCQEQFV 622
            ..|.::|.|:.|  .:|:.:.::.||:..|..|            ....||||...:.:...|.:
  Rat   400 AVVDMNEKGTEA--AAASGLLSQPPSLNMTSAP------------HAHFNRPFLLLLWEVTTQSL 450

  Fly   623 LASGKIYTP 631
            |..||:..|
  Rat   451 LFLGKVVNP 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn100ANP_651818.1 serpin 41..>146 CDD:476815
serpin <380..627 CDD:381000 65/317 (21%)
Serpina11NP_001008776.1 serpinA11 50..462 CDD:381025 88/399 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.