DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn100A and serpina1

DIOPT Version :10

Sequence 1:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001071226.1 Gene:serpina1 / 322701 ZFINID:ZDB-GENE-030131-1421 Length:429 Species:Danio rerio


Alignment Length:349 Identity:83/349 - (23%)
Similarity:148/349 - (42%) Gaps:64/349 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 LAKIMAAPALTAGEPEKVR-------------LPLQKLENAVKTAAKDGADEIMLALESHLPSVS 366
            |::|.:....:|..||:|.             ....:||.....|.:||    ...::..|....
Zfish   111 LSQIYSGLGYSALTPEQVNEGYEHLLHMLGHSQDAMQLEAGAGVAIRDG----FKVVDQFLKDAQ 171

  Fly   367 RVNGARSL---FQQDDITSALSANSITGRSAGSK-----------SKMLLFNGLYYRGSWANPF- 416
            ....:.:.   |.:.:|.:| ..|....|....|           :.|:|.|.:|:||.|..|| 
Zfish   172 HYYNSEAFGVDFSKPEIAAA-EINKFIARKTHDKITNMVKDLDADTVMMLINYMYFRGKWEKPFD 235

  Fly   417 YQLRDGSDEFFFMTNEDAVKAPMMHARGKFQVADLPQVKARVLSLPYETSRYALCIVLPDETEGL 481
            .:|...:|  |.:..:..|:..||...|::.:...|..:..|:.:||: ...::.|||||:.:  
Zfish   236 AKLTHKAD--FKVDQDTTVQVDMMKRTGRYDIYQDPVNQTTVMMVPYK-GNTSMMIVLPDDGK-- 295

  Fly   482 SDVISQLQTSDFLLAKKQFQMK----ELHISMPKFQVEETSRSEAMLKQMGLKKVFSRTEAQLSL 542
               :.:|:.|......|.:..|    .:.:.||||.:..||:.:.:||.||:...|: .:|..|.
Zfish   296 ---MKELEESICRHHLKNWHDKLFRSSVDLFMPKFSISATSKLDGILKDMGMTDAFN-DKADFSG 356

  Fly   543 LSEDPDVHVDEIVQFVNVRVDEGGSSANSLSAATMQARTPSVESTVLPVPEPEPELPGVERFEVN 607
            ::|:..|.|.:::....:.|||.|:.|.:::  |::....|:..||:                :|
Zfish   357 MTEEVKVKVSQVLHQAVMSVDEKGTEAAAIT--TIEIMPMSLPDTVI----------------LN 403

  Fly   608 RPFAYFIVDCQEQFVLASGKIYTP 631
            |||...||:.....:|..|||..|
Zfish   404 RPFLVLIVEDSTMSILFMGKITNP 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn100ANP_651818.1 serpin 41..>146 CDD:476815
serpin <380..627 CDD:381000 66/262 (25%)
serpina1NP_001071226.1 serpinA_A1AT-like 65..429 CDD:381017 83/349 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.