DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn100A and serpinc1

DIOPT Version :10

Sequence 1:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_878283.1 Gene:serpinc1 / 321545 ZFINID:ZDB-GENE-030131-264 Length:450 Species:Danio rerio


Alignment Length:347 Identity:81/347 - (23%)
Similarity:145/347 - (41%) Gaps:81/347 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 KNLEENETVQEEEKL---AKIMAAPALTAGEPEKVRLPL-----QKLENAVKTAAKDGADEIMLA 357
            |:...|||.|...:.   ||:|  |.....:||..|:.:     .|.||.:|....:|       
Zfish   165 KSTTFNETFQHISETVYGAKLM--PLDFKEKPEASRITINEWIANKTENRIKDTLPEG------- 220

  Fly   358 LESHLPSVSRVNGARSLFQQDDITSALSANSITGRSAGSKSKMLLFNGLYYRGSWANPFYQLRDG 422
                                     ::..|:|          ::|.|.:|::|.|.|.|    |.
Zfish   221 -------------------------SIDTNTI----------LVLVNAIYFKGQWKNKF----DK 246

  Fly   423 SDEF---FFMTNEDAVKAPMMHARGKFQVADLPQVKARVLSLPYETSRYALCIVLPDETEGLSDV 484
            .:..   |.::.......|||:...|||.|.:|:.|.::|.|||......:.::||.|...||:|
Zfish   247 QNVMKLDFHVSPTHKCPVPMMYQEKKFQYAKIPEDKVKILELPYNGGDITMVLILPIEGATLSEV 311

  Fly   485 ISQLQTSDFLLAKKQFQMKE--LHISMPKFQVEETSRSEAMLKQMGLKKVFSRTEAQLSLL---S 544
            ::.:....  |......|||  :.:.:|:|:||::...:..|.:|||:.:||...|.|..:   :
Zfish   312 VANMNLKK--LVGWLHAMKETTVAVQIPRFRVEDSFSLKEQLTKMGLEDLFSPANASLPGMVADA 374

  Fly   545 EDPDVHVDEIVQFVNVRVDEGGSSANSLSAATMQARTPSVESTVLPVPEPEPELPGVERFEVNRP 609
            |.|::.:.:......:.|:|.||.|::.:|.....|:.::..               |:|..:||
Zfish   375 EGPNLFISDAYHKAFLEVNEEGSEASAATAVVATGRSLNIFR---------------EQFVADRP 424

  Fly   610 FAYFIVDCQEQFVLASGKIYTP 631
            |..||.:.....::.:|::..|
Zfish   425 FLLFIRESSINALIFTGRVANP 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn100ANP_651818.1 serpin 41..>146 CDD:476815
serpin <380..627 CDD:381000 62/254 (24%)
serpinc1NP_878283.1 serpin 53..448 CDD:476815 81/347 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.