DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn100A and Serpinb9d

DIOPT Version :10

Sequence 1:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001100821.1 Gene:Serpinb9d / 306890 RGDID:1308725 Length:337 Species:Rattus norvegicus


Alignment Length:260 Identity:76/260 - (29%)
Similarity:129/260 - (49%) Gaps:36/260 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 ITSALSANSITGRSAGSKSKMLLFNGLYYRGSWANPFYQLRDGSDEFFFMTNEDAVK-APMMHAR 443
            |...||::|:     ||::|:::.|.||::|||.:.|.  ::.:.|..|..|:...| ..||...
  Rat   106 IPELLSSDSV-----GSETKLIMVNALYFQGSWLHCFD--KEFTMEMPFKINKKETKPVQMMWQE 163

  Fly   444 GKFQVADLPQVKARVLSLPYETSRYALCIVLPDETEGLSDVISQLQTSDFLLA--KKQF-QMKEL 505
            ..|.||.:.:::|::|.:||.....:..::||||...:..|.|.| |.:.|.|  |.:| ...|:
  Rat   164 ETFDVAYVKEIQAQILVMPYRGMEMSFMVLLPDEGVDIRKVESSL-TFEKLTAWTKPEFIYSTEV 227

  Fly   506 HISMPKFQVEETSRSEAMLKQMGLKKVFSRTEAQLSLLSEDPDVHVDEIVQFVNVRVDEGGSSAN 570
            ::.:||||::|.....|:.:.:|:..|||..:|.||.:..:.|:.|.:.|....|.|:|.|:.|.
  Rat   228 YVYLPKFQLQEQYDMTALFQHLGMIDVFSEIKADLSGMCPEKDLCVSKFVHECVVEVNEEGTEAA 292

  Fly   571 SLSAA----TMQARTPSVESTVLPVPEPEPELPGVERFEVNRPFAYFIVDCQEQFVLASGKIYTP 631
            :.|||    :....||:                    |..:|||.:||...|...:|..|:..:|
  Rat   293 AASAADCCYSCSEYTPT--------------------FCADRPFLFFIRHNQTNSILFCGRFSSP 337

  Fly   632  631
              Rat   338  337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn100ANP_651818.1 serpin 41..>146 CDD:476815
serpin <380..627 CDD:381000 74/254 (29%)
Serpinb9dNP_001100821.1 serpin 1..334 CDD:476815 75/255 (29%)
Blue background indicates that the domain is not in the aligned region.

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