DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn100A and Serpinc1

DIOPT Version :10

Sequence 1:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001012027.1 Gene:Serpinc1 / 304917 RGDID:1307404 Length:465 Species:Rattus norvegicus


Alignment Length:439 Identity:85/439 - (19%)
Similarity:178/439 - (40%) Gaps:82/439 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 LQKEQKQQATTESELESQPEETTTLSVEKQEKPDMAAEENPAEKQQNKRSDQEESQIKNLEE--- 305
            :.:...::||.|..||.:..|.|...|.:..|.:.....|..:...:.::|.:...:..|..   
  Rat    55 IYRSPAKKATEEDVLEQKVPEATNRRVWELSKANSRFATNFYQHLADSKNDNDNIFLSPLSISTA 119

  Fly   306 ---------NETVQEEEKLAKIMAAPALTAGEPEKVRLPLQKLENAVKTAAKDGADEIMLALESH 361
                     |.|:::   |.::.....::....:::.....||...:...|..         .|:
  Rat   120 FAMTKLGACNNTLKQ---LMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANK---------SSN 172

  Fly   362 LPSVSRVNGARSL----------------------FQQDDITSALS-----ANSITGR------- 392
            |.|.:|:.|.:||                      |:::...|.::     ||...||       
  Rat   173 LVSANRLFGDKSLTFNESYQDVSEIVYGAKLQPLDFKENPEQSRVTINNWVANKTEGRIKDVIPQ 237

  Fly   393 -SAGSKSKMLLFNGLYYRGSWANPFYQLRDGSDEFFFMTNEDAVKAPMMHARGKFQVADLPQVKA 456
             :....:.::|.|.:|::|.|.:.|.......:.|..:..:..: .|||:..|||:...:.: ..
  Rat   238 GAIDELTALVLVNTIYFKGLWKSKFSPENTRKEPFHKVDGQSCL-VPMMYQEGKFKYRRVGE-GT 300

  Fly   457 RVLSLPYETSRYALCIVLPDETEGLSDVISQLQTSDFLLAKKQFQMKE--LHISMPKFQVEETSR 519
            :||.:|::.....:.::||...:.|:.|..:|...  ||.:...::.|  |.:.:|:|::|::..
  Rat   301 QVLEMPFKGDDITMVLILPKPEKSLAKVEQELTPE--LLQEWLDELSEVMLVVHVPRFRIEDSFS 363

  Fly   520 SEAMLKQMGLKKVFSRTEAQL-SLLSED-PDVHVDEIVQFVNVRVDEGGSSANSLSAATMQARTP 582
            .:..|:.|||..:||..::|| .:::|. .|:.|.:......:.|:|.||.|.:.::..:..|:.
  Rat   364 LKEQLQDMGLVDLFSPEKSQLPGIIAEGRDDLFVSDAFHKAFLEVNEEGSEAAASTSVVITGRSL 428

  Fly   583 SVESTVLPVPEPEPELPGVERFEVNRPFAYFIVDCQEQFVLASGKIYTP 631
            :               |....|:.||||...|.:.....::..|::..|
  Rat   429 N---------------PSRVTFKANRPFLVLIREVALNTIIFMGRVSNP 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn100ANP_651818.1 serpin 41..>146 CDD:476815
serpin <380..627 CDD:381000 57/263 (22%)
Serpinc1NP_001012027.1 serpinC1_AT3 71..464 CDD:381002 80/423 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.