DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn100A and Serpina16

DIOPT Version :10

Sequence 1:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_853661.2 Gene:Serpina16 / 299271 RGDID:727888 Length:415 Species:Rattus norvegicus


Alignment Length:307 Identity:73/307 - (23%)
Similarity:116/307 - (37%) Gaps:79/307 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 IMLALESHLPSVSRVNGARSLFQQDDITSALSANSITGRSAGSKSKML----------LFNGLYY 408
            :.||..|:..:|..::.......|..|..|:.|     |:.|..:|:|          |.|..::
  Rat   148 VKLANSSYNSNVVLISFGNYGLAQKQIDLAIRA-----RTHGKITKLLRILKPPTNLFLANYNFF 207

  Fly   409 RGSWANPFYQLRDGSDEFFFMTNEDAVK--APMMHARGKFQVADLPQVKARVLSLPYETSRYALC 471
            :|.|..||.: :.....:|::  ||..|  .|||...|.||:....|:.:.||.||: |...:..
  Rat   208 KGKWKYPFNR-KHTRMRYFWL--EDGTKTLVPMMQRVGWFQLQYFSQMHSYVLQLPF-TCSISGV 268

  Fly   472 IVLPDETEGLSDVISQLQTSDFLLAKKQFQ-------MKELHISMPKFQVEETSRSEAMLKQMGL 529
            ..|||:        .:.:.|:..|.::.|:       |.:..:..|||.:......|      .|
  Rat   269 FFLPDD--------GKFEESEKALLEQSFETWIQPFPMSKRWLFFPKFSIPVALHLE------NL 319

  Fly   530 KKVFSRTEAQLSLLSEDPDVH----------VDEIVQFVNVRVDEGGSSANSLSAATMQARTPSV 584
            |.|    .:.:.|.||..|:.          |...|..|.:.|:|.|...:              
  Rat   320 KHV----NSNIKLFSEHMDLSRITLQKAPLTVSTAVHRVELTVNEDGEEKD-------------- 366

  Fly   585 ESTVLPVPEPEPELPGVERFEVNRPFAYFIVDCQEQFVLASGKIYTP 631
            ||      :|||:|   .....||.|...|:|.....:|..||:..|
  Rat   367 ES------QPEPDL---ATLHFNRSFLLLILDETSNSLLFMGKVVNP 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn100ANP_651818.1 serpin 41..>146 CDD:476815
serpin <380..627 CDD:381000 65/275 (24%)
Serpina16NP_853661.2 serpinA16_HongrES1-like 40..406 CDD:381053 73/307 (24%)
Blue background indicates that the domain is not in the aligned region.

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