DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn100A and Serpina3n

DIOPT Version :10

Sequence 1:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_113719.3 Gene:Serpina3n / 24795 RGDID:3747 Length:418 Species:Rattus norvegicus


Alignment Length:473 Identity:114/473 - (24%)
Similarity:179/473 - (37%) Gaps:105/473 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 VIGFETL------KRIKLDDEDIPAIPSDGYGQEIIDKEASKFDRDVDDKQYVEKPVAQAEAELL 244
            ::|.:||      |..:||...:.:|.:| :...:..|.|.:    ..||..|..|::.:.|..:
  Rat    25 ILGEDTLFHEDQDKGTQLDSLTLASINTD-FAFSLYKKLALR----NPDKNVVFSPLSISAALAV 84

  Fly   245 QKEQKQQATTESELESQPEETTTLSVEKQEKPDMAAEENPAEKQQNKRSDQEESQIKN-----LE 304
            .....:..:.|..||.       |.....|.|:...........|.....::|.||..     :|
  Rat    85 VSLGAKGNSMEEILEG-------LKFNLTETPETEIHRGFGHLLQRLSQPRDEIQISTGNALFIE 142

  Fly   305 ENETVQEE--EKLAKIMAAPALTAGEPEKVRLPLQKLENAVKTAAKDGADEIMLALESHLPSVSR 367
            :...|..|  ||...:..|.|.||        ..|:...|.|..                     
  Rat   143 KRLQVLAEFQEKAKALYQAEAFTA--------DFQQSREAKKLI--------------------- 178

  Fly   368 VNGARSLFQQDDITSALSANSITG--RSAGSKSKMLLFNGLYYRGSWANPFYQLRDGSDEF---F 427
                      :|..|..:...|.|  .:...|:.|:|.|.:|::|.|..||    |..|.|   |
  Rat   179 ----------NDYVSKQTQGKIQGLITNLAKKTSMVLVNYIYFKGKWKVPF----DPRDTFQSEF 229

  Fly   428 FMTNEDAVKAPMMHARGKFQVADLPQVK-----ARVLSLPYETSRYALCIVLPDETEGLSDVISQ 487
            :......||.|||    |.:....|.|:     ..|:.|.|..:..|| .:|||:.: :..|.:.
  Rat   230 YSGKRRPVKVPMM----KLEDLTTPYVRDEELNCTVVELKYTGNASAL-FILPDQGK-MQQVEAS 288

  Fly   488 LQTSDFLLAKKQFQ---MKELHISMPKFQVEETSRSEAMLKQMGLKKVFSRTEAQLSLLSEDPDV 549
            ||.......|...:   :.||:  :|||.:......|.:|.::|:|:||| |:|.||.::.|.|:
  Rat   289 LQPETLRRWKDSLRPSMIDELY--LPKFSISADYNLEDVLPELGIKEVFS-TQADLSGITGDKDL 350

  Fly   550 HVDEIVQFVNVRVDEGGSSANSLSAATMQARTPSVESTVLPVPEPEPELPGVERFEVNRPFAYFI 614
            .|.::|....:.|.|.|:.|   :|||          .|..||......|.:..|:  |||...|
  Rat   351 MVSQVVHKAVLDVAETGTEA---AAAT----------GVKFVPMSAKLDPLIIAFD--RPFLMII 400

  Fly   615 VDCQEQFVLASGKIYTPE 632
            .|.:........||:.|:
  Rat   401 SDTETAIAPFLAKIFNPK 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn100ANP_651818.1 serpin 41..>146 CDD:476815
serpin <380..627 CDD:381000 73/259 (28%)
Serpina3nNP_113719.3 serpinA3_A1AC 37..418 CDD:381019 110/459 (24%)
RCL 367..394 10/41 (24%)
Blue background indicates that the domain is not in the aligned region.

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