DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn100A and srp-7

DIOPT Version :10

Sequence 1:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001122924.1 Gene:srp-7 / 179195 WormBaseID:WBGene00005648 Length:373 Species:Caenorhabditis elegans


Alignment Length:408 Identity:99/408 - (24%)
Similarity:169/408 - (41%) Gaps:89/408 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 AELLQKEQ-------KQQATTESELESQPEETTTLSVEKQEKPDMAAEENPAEKQQNKRSDQ-EE 297
            |.|||.|.       :||..:||...|.......||:           .:.|.|.:.:  || .|
 Worm     9 ALLLQSETDFGLGLLRQQNISESLAFSPLSIALALSL-----------VHVAAKGETR--DQIRE 60

  Fly   298 SQIKNLEENETVQEEEKLAKIMAAPALTAGEPEKVRLPLQKLENAVKTAAKDGADEIMLALESHL 362
            :.:|...:.   |.|:..|.|.|  ||.|.|    |....||.|.|.|.|.      ....:|:|
 Worm    61 ALVKGSTDE---QLEQHFANISA--ALLAAE----RGTEVKLANHVFTRAG------FKIKQSYL 110

  Fly   363 PSVSRV--NGARSLFQQDDITSALSANSITGRSAGSKSKML-------------LFNGLYYRGSW 412
            ..|.::  .||.||...:...:|.:.|:....:.|...|.:             |.|.||::..|
 Worm   111 DDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADW 175

  Fly   413 ANPFYQLRDGSDEFFFMTNEDAVK-APMMHA---------RGKFQVADLPQVKARVLSLPYETSR 467
            .|.|.:......|||  ::.|:.: ...:||         ..:||          ||||||:.:.
 Worm   176 QNKFKKDSTFKSEFF--SSADSKREIDFLHASSVSRDYAENDQFQ----------VLSLPYKDNT 228

  Fly   468 YALCIVLPDETEGLSDVISQLQTSDFLLAKKQFQMKELHISMPKFQVEETSRSEAMLKQMGLKKV 532
            :||.|.||....||::.:..|.::.............:::.:||:::|.....|..|:.:|:||.
 Worm   229 FALTIFLPKTRFGLTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKA 293

  Fly   533 FSRTEAQLSLLSEDPDVHVDEIVQFVNVRVDEGGSSANSLSAATMQARTPSVESTVLPVPEPEPE 597
            |. .:|.|..:::  .::|.::.....:.|||.|:.|.:.:..::     |::|.:..:.||:. 
 Worm   294 FD-NDADLGNMAD--GLYVSKVTHKALIEVDEEGTKAAAATTVSI-----SLKSAMFVMEEPKD- 349

  Fly   598 LPGVERFEVNRPFAYFIV 615
                  |..:.|| :|::
 Worm   350 ------FTADHPF-FFVL 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn100ANP_651818.1 serpin 41..>146 CDD:476815
serpin <380..627 CDD:381000 58/259 (22%)
srp-7NP_001122924.1 serpinL_nematode 14..372 CDD:381047 95/403 (24%)
Blue background indicates that the domain is not in the aligned region.

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