DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn100A and Serpina3a

DIOPT Version :10

Sequence 1:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_006240581.2 Gene:Serpina3a / 100909605 RGDID:6502633 Length:410 Species:Rattus norvegicus


Alignment Length:341 Identity:81/341 - (23%)
Similarity:141/341 - (41%) Gaps:76/341 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 EKVRLPLQKLENAVKTAAKDGADEIMLALESHLPSVSRV-NGARSL---------FQQDDITSAL 384
            :::.||..:::.:..:|         |.::.||..::.. ..||:|         |||......|
  Rat   112 QRLNLPGDQVQISTGSA---------LFIKKHLQILAEFQEKARALYQAEAFSTDFQQPHEAKKL 167

  Fly   385 SANSITGRSAG----------SKSKMLLFNGLYYRGSWANPFYQLRDGSDEF---FFMTNEDAVK 436
            ..:.:..::.|          .|:.|:|.|.:|::|.|..||    |..|.|   |::..:.:||
  Rat   168 INDYVRKQTQGKIKELISVLDKKTSMVLVNYIYFKGKWKMPF----DPHDTFQSEFYLDEKKSVK 228

  Fly   437 APMMHARGKFQVADLP-----QVKARVLSLPYETSRYALCIVLPDETEGLSDVISQLQTSDFLLA 496
            .|||    |.:....|     ::...||.|.|..:..|| .:|||:.. :..|.:.||.......
  Rat   229 VPMM----KIEKLTTPYFRDEELSCSVLELKYTGNASAL-FILPDQGR-MQQVEASLQPETLRRW 287

  Fly   497 KKQFQMKEL-HISMPKFQVEETSRSEAMLKQMGLKKVFSRTEAQLSLLSEDPDVHVDEIVQFVNV 560
            |...:.:.: .:.||||.:....|...:|.::|:::|||: :|.||.::...|:.|.::|....:
  Rat   288 KDTLRPRRIDELRMPKFSISTDMRLGDILPELGIREVFSQ-QADLSRITGAKDLSVSQVVHKAVL 351

  Fly   561 RVDEGGSSANSLSAATMQARTPSVESTVLPVPEPEPELPGVERF-----EVNRPFAYFIVDCQEQ 620
            .|.|.|:.|.:.:...:                    :|...:|     ..||||...|.|....
  Rat   352 DVTETGTEAAAATGVKI--------------------IPMCAKFYYVTMYFNRPFLMIISDTNTH 396

  Fly   621 FVLASGKIYTPEFKED 636
            ..|...|:..|  |||
  Rat   397 IALFMAKVTNP--KED 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn100ANP_651818.1 serpin 41..>146 CDD:476815
serpin <380..627 CDD:381000 64/270 (24%)
Serpina3aXP_006240581.2 serpinA3_A1AC 27..408 CDD:381019 78/337 (23%)
Blue background indicates that the domain is not in the aligned region.

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