DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaPV and AT3G28490

DIOPT Version :10

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_189490.2 Gene:AT3G28490 / 822479 AraportID:AT3G28490 Length:288 Species:Arabidopsis thaliana


Alignment Length:229 Identity:69/229 - (30%)
Similarity:112/229 - (48%) Gaps:21/229 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 LYCLYNRTTSPFLILAPLKMELVGLDPYMVLYHDVLSPKEIKELQGMATPGLKRA-TVYQASSGR 366
            |..::::.:|....:.|.::..:...|...||...||.:|...|..:|...|::: .|....||.
plant    13 LLLIFSQISSFSFSVDPTRITQLSWTPRAFLYKGFLSDEECDHLIKLAKGKLEKSMVVADVDSGE 77

  Fly   367 NEVVKTRTSKVAWFPDGYNPLTVRLNARISDMTGFNLYGSEMLQLMNYGLGGHYDQHYDFFNKTN 431
            :|..:.|||...:.....:.:...:.|:::..|.......|.||:::|..|..||.|:|:|  .:
plant    78 SEDSEVRTSSGMFLTKRQDDIVANVEAKLAAWTFLPEENGEALQILHYENGQKYDPHFDYF--YD 140

  Fly   432 SNMTAMSGDRIATVLFYLTDVEQGGATVFPNIR------------------KAVFPQRGSVVMWY 478
            .....:.|.||||||.||::|.:||.|||||.:                  .||.|::|..::::
plant   141 KKALELGGHRIATVLMYLSNVTKGGETVFPNWKGKTPQLKDDSWSKCAKQGYAVKPRKGDALLFF 205

  Fly   479 NLKDNGQIDTQTLHAACPVIVGSKWVCNKWIRER 512
            ||..||..|..:||.:||||.|.||...:||..|
plant   206 NLHLNGTTDPNSLHGSCPVIEGEKWSATRWIHVR 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..166 CDD:462433
NrfG 179..>256 CDD:443378
TPR repeat 179..213 CDD:276809
TPR repeat 218..248 CDD:276809
P4Hc 339..510 CDD:214780 60/189 (32%)
AT3G28490NP_189490.2 PLN00052 28..288 CDD:177683 67/214 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.