DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaPV and P4H2

DIOPT Version :9

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_566279.1 Gene:P4H2 / 819804 AraportID:AT3G06300 Length:299 Species:Arabidopsis thaliana


Alignment Length:227 Identity:74/227 - (32%)
Similarity:113/227 - (49%) Gaps:28/227 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 CLYNRTTSPFLILAPLKMELVGLDPYMVLYHDVLSPKEIKELQGMATPGLKRATVYQASSGRNEV 369
            ||   .:||..|:.|.|::.|...|...:|...|:..|...|..:|...|:|:.|....:|.::|
plant    24 CL---ISSPSSIINPSKVKQVSSKPRAFVYEGFLTDLECDHLISLAKENLQRSAVADNDNGESQV 85

  Fly   370 VKTRTSKVAWFPDGYNPLTVRLNARISDMTGFNLYGSEMLQLMNYGLGGHYDQHYDFF-NKTNSN 433
            ...|||...:...|.:|:...:..::|..|.......|.||::.|..|..||.|:|:| :|.|  
plant    86 SDVRTSSGTFISKGKDPIVSGIEDKLSTWTFLPKENGEDLQVLRYEHGQKYDAHFDYFHDKVN-- 148

  Fly   434 MTAMSGDRIATVLFYLTDVEQGGATVFPNIRK---------------------AVFPQRGSVVMW 477
             .|..|.||||||.||::|.:||.||||:.::                     ||.|::|:.:::
plant   149 -IARGGHRIATVLLYLSNVTKGGETVFPDAQEFSRRSLSENKDDLSDCAKKGIAVKPKKGNALLF 212

  Fly   478 YNLKDNGQIDTQTLHAACPVIVGSKWVCNKWI 509
            :||:.:...|..:||..||||.|.||...|||
plant   213 FNLQQDAIPDPFSLHGGCPVIEGEKWSATKWI 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528
TPR_11 179..250 CDD:290150
TPR repeat 179..213 CDD:276809
TPR repeat 218..248 CDD:276809
P4Hc 339..510 CDD:214780 63/193 (33%)
P4H2NP_566279.1 P4Hc 55..245 CDD:214780 63/193 (33%)
ShKT 259..299 CDD:214586
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.920

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