DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaPV and AT-P4H-1

DIOPT Version :9

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_181836.1 Gene:AT-P4H-1 / 818910 AraportID:AT2G43080 Length:283 Species:Arabidopsis thaliana


Alignment Length:257 Identity:73/257 - (28%)
Similarity:122/257 - (47%) Gaps:40/257 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 TGVPTAYQIGCRGQ----------FPPSADSKLYCLYNRTTSPFLILAPLKMELVGLDPYMVLYH 335
            ||.|:..  |.|||          :....|::|           |.:..:|.|:|...|.:::.|
plant    39 TGFPSLR--GLRGQNTRYLRDVSRWANDKDAEL-----------LRIGNVKPEVVSWSPRIIVLH 90

  Fly   336 DVLSPKEIKELQGMATPGLKRATVYQASSGRNEVVKTRTSKVAWFP--DGYNPLTVRLNARISDM 398
            |.|||:|.:.|:.:|.|.|:.:||....:|:......|||...:..  :...|:...:..||:..
plant    91 DFLSPEECEYLKAIARPRLQVSTVVDVKTGKGVKSDVRTSSGMFLTHVERSYPIIQAIEKRIAVF 155

  Fly   399 TGFNLYGSEMLQLMNYGLGGHYDQHYDFFNKTNSNMTAMSGDRIATVLFYLTDVEQGGATVFP-- 461
            :.......|::|::.|.....|..|:|:|..|.:  ....|.|:||:|.||||..:||.|.||  
plant   156 SQVPAENGELIQVLRYEPQQFYKPHHDYFADTFN--LKRGGQRVATMLMYLTDDVEGGETYFPLA 218

  Fly   462 ---------NIRK--AVFPQRGSVVMWYNLKDNGQIDTQTLHAACPVIVGSKWVCNKWIRER 512
                     .|.|  :|.|.:|..|:::::..:||.|.:::|..|.|:.|.||...||:|::
plant   219 GDGDCTCGGKIMKGISVKPTKGDAVLFWSMGLDGQSDPRSIHGGCEVLSGEKWSATKWMRQK 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528
TPR_11 179..250 CDD:290150
TPR repeat 179..213 CDD:276809
TPR repeat 218..248 CDD:276809
P4Hc 339..510 CDD:214780 55/185 (30%)
AT-P4H-1NP_181836.1 PLN00052 80..281 CDD:177683 61/203 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.920

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