DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaPV and p4ha3

DIOPT Version :9

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_021322008.1 Gene:p4ha3 / 563281 ZFINID:ZDB-GENE-041010-4 Length:616 Species:Danio rerio


Alignment Length:525 Identity:145/525 - (27%)
Similarity:262/525 - (49%) Gaps:51/525 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TYQVLLLLLR---QAKGEESHCTSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRL 76
            |..::|.||.   ::.||  ..||:..:.:.:..|.:|||:|..|.....::|:.::|..:.:..
Zfish     6 TLFIVLYLLNMPDESFGE--MFTSMLSVNQAVSAERKLIDHLIIYIEHEAQRLEDIKRFFSRVTS 68

  Fly    77 ENDKARSSTEEYLSNPLNSFSLIRRMNRDWIIWQLYMDDPVGISQV-ERIQELRE-------HMP 133
            .:|...:...:.::||:.:|.|::|:..:|:       :.|..::. |.|:.|||       .:|
Zfish    69 LHDGIYNEPSDPIANPIAAFKLVKRLKSEWL-------NVVHSTEAEENIKVLREDYRRMESSLP 126

  Fly   134 THTDVEEAVTALDRIQSTYGLKVPEISHGFLNGKQ-----YNVSLTVL----DTYAMGQILFDQK 189
            ...|:..|...|.|:|..|.|.|..:..|......     |.:|::.:    |.:.:|::.:|.:
Zfish   127 KLEDLRGAAHGLMRLQDVYNLHVESLVRGHFQQISDPVDFYKLSVSDMLSGDDCFLVGKVAYDLE 191

  Fly   190 NYLAAASWIYQSVVLMEAFSMAAPLEISKNEVRMVYAETLLKLNQHADALKVVNIALTDNPHDIK 254
            :|..:..|..::|.|......:...|.:..:.....|.:..|....:.||.:....|..:|.:.:
Zfish   192 DYYHSVLWFEEAVRLFRGTEWSPENEGTLEDALDHLAFSHFKTGNISHALSLSRELLLHDPMNRR 256

  Fly   255 LLLKKSEIETMIRTGTNNAPPVKVQAT-----GV----PTAYQIGC--RGQFPPSADS-KLYCLY 307
            :.....:.|.::   ..|.|......|     |:    ..||:..|  :|..|...:: .|:|.|
Zfish   257 VHFNVEKYEKLL---NENLPATSSGLTLKRPDGIYLRTRNAYEQLCQTKGSQPKHFENPSLFCDY 318

  Fly   308 NRTTSPFLILAPLKMELVGLDPYMVLYHDVLSPKEIKELQGMATPGLKRATVYQASSGRNE-VVK 371
            ....||.|.|.|::.|::.|.||:||:|..::..|.|.::..|.|||:|:.|   :||.|: ..:
Zfish   319 FTNGSPALFLQPIRREIISLQPYVVLFHGFVTQAEAKNIRKYAMPGLRRSVV---ASGMNQATAE 380

  Fly   372 TRTSKVAWFPDGYNPLTVRLNARISDMTGFNLYG--SEMLQLMNYGLGGHYDQHYDFFNKTNSNM 434
            .|.||.||..:..:.:..:|:.||:.:||.|:..  :|.||::|||:||||:.|:|.....:|.:
Zfish   381 YRISKSAWLKESAHEVVGKLDQRITLVTGLNVQPPYAEYLQVVNYGIGGHYEPHFDHATSDSSPL 445

  Fly   435 TAM-SGDRIATVLFYLTDVEQGGATVFPNIRKAVFPQRGSVVMWYNLKDNGQIDTQTLHAACPVI 498
            ..: :|:|:||::.||:.|:.||:|.|.....:|...:.:.:.|:||..|||.:..||||.||||
Zfish   446 YRLKTGNRVATIMIYLSPVQAGGSTAFIYANFSVPVVQNAALFWWNLHKNGQGNVDTLHAGCPVI 510

  Fly   499 VGSKW 503
            ||:||
Zfish   511 VGNKW 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528 32/136 (24%)
TPR_11 179..250 CDD:290150 12/70 (17%)
TPR repeat 179..213 CDD:276809 6/33 (18%)
TPR repeat 218..248 CDD:276809 5/29 (17%)
P4Hc 339..510 CDD:214780 65/169 (38%)
p4ha3XP_021322008.1 P4Ha_N 27..157 CDD:311993 32/136 (24%)
P4Hc 350..519 CDD:214780 65/169 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583391
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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