DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaPV and p4ha2

DIOPT Version :10

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_012814344.2 Gene:p4ha2 / 493342 XenbaseID:XB-GENE-957618 Length:537 Species:Xenopus tropicalis


Alignment Length:516 Identity:179/516 - (34%)
Similarity:277/516 - (53%) Gaps:38/516 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 TSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRLENDKARSSTEEYLSNPLNSFSL 98
            ||...|..|:..|..|:.:|::|..|.|::|..::|..:.:...:.::.:..|.||.:|:|::.|
 Frog    25 TSTGQMTDLIFRERDLLQSLKEYIREEEERLSKIKRWASEVDELSSRSTADPEGYLGHPVNAYKL 89

  Fly    99 IRRMNRDWIIWQ--LYMDDPVGISQVERIQELREHMPTHTDVEEAVTALDRIQSTYGLKVPEISH 161
            ::|.|.||...:  :..|...|.  :......||:.||..|...|..||.|||.||.|....|:.
 Frog    90 VKRFNTDWSSLENLVLQDSAKGF--IANFTFQREYFPTEEDETGAARALMRIQDTYKLDPDVIAK 152

  Fly   162 GFLNGKQYNVSLTVLDTYAMGQILFDQKNYLAAASWIYQSVVLMEAFSMAAPLEISKNEVRMVYA 226
            |.|.|..|..||:..|::.||:|.:...:|.....|:.|::..|:....|.   ::|.:|....:
 Frog   153 GKLPGTNYISSLSADDSFGMGKIAYHDGDYYHTVLWMQQALKQMDEGEDAV---VNKVDVLDYLS 214

  Fly   227 ETLLKLNQHADALKVVNIALTDNP-HD-----IKLLLK-----KSEIETMIRTGTNNAPPVKVQA 280
            .|:.:|.....||::....|..:| ||     :|...|     |:|::....|.|.:|    .:.
 Frog   215 YTVFQLGDVPRALELTKRLLALDPNHDRAVNNLKYFEKMQEKQKAELKQNESTNTESA----TRQ 275

  Fly   281 TGVPT----------AYQIGCRGQ---FPPSADSKLYCLY-NRTTSPFLILAPLKMELVGLDPYM 331
            .||.:          .|:..|||:   ..|....:|:|.| |...||:|||:|:|:|.....|.:
 Frog   276 PGVYSRPLDYLPERDVYEALCRGEGVKMNPRRQRRLFCRYHNGNRSPYLILSPVKVEDEWDSPRI 340

  Fly   332 VLYHDVLSPKEIKELQGMATPGLKRATVYQASSGRNEVVKTRTSKVAWFPDGYNPLTVRLNARIS 396
            |.|.:.||.:||.:::.:|.|.|.||||....:|...|...|.||.||..:..:|:..|:|.|:.
 Frog   341 VRYLNALSDEEIAKIKELAKPKLARATVRDPKTGVLSVANYRVSKSAWLEENDDPVIARVNLRMQ 405

  Fly   397 DMTGFNLYGSEMLQLMNYGLGGHYDQHYDFFNKTNSNMTAM--SGDRIATVLFYLTDVEQGGATV 459
            .:||..:..:|:||:.|||:||.|:.|:||..|...::...  :|:|:||.|.|::|||.|||||
 Frog   406 AITGLTVDTAELLQVANYGMGGQYEPHFDFSRKDEPDVFKRLGTGNRVATFLNYMSDVEAGGATV 470

  Fly   460 FPNIRKAVFPQRGSVVMWYNLKDNGQIDTQTLHAACPVIVGSKWVCNKWIREREQIFSRPC 520
            ||:...|::|::|:.|.||||..:|:.|.:|.||||||:||||||.|||..||.|.|.|||
 Frog   471 FPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLVGSKWVSNKWFHERGQEFLRPC 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..166 CDD:462433 40/132 (30%)
NrfG 179..>256 CDD:443378 19/82 (23%)
TPR repeat 179..213 CDD:276809 8/33 (24%)
TPR repeat 218..248 CDD:276809 7/29 (24%)
P4Hc 339..510 CDD:214780 78/172 (45%)
p4ha2XP_012814344.2 P4Ha_N 26..157 CDD:462433 40/132 (30%)
BepA 166..>247 CDD:443813 19/83 (23%)
TPR repeat 166..201 CDD:276809 8/34 (24%)
TPR repeat 206..236 CDD:276809 7/29 (24%)
P4Hc 348..521 CDD:214780 78/172 (45%)

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