DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaPV and CG9698

DIOPT Version :9

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_651806.2 Gene:CG9698 / 43629 FlyBaseID:FBgn0039784 Length:547 Species:Drosophila melanogaster


Alignment Length:557 Identity:174/557 - (31%)
Similarity:269/557 - (48%) Gaps:75/557 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLPVRVLLTYQVLLLLLRQA----KGEESHCTSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTV 67
            :.||     :.||.||..||    .|.| ..:|:..|.|:...|.:::.:::.:..:.:.||..:
  Fly     2 IFPV-----FSVLFLLFHQAIPSVSGVE-FFSSIHEMTKVFGYEQKMVLHMQKFLSDNQDKLDFL 60

  Fly    68 RRSITSLRLENDKARSSTEEYLSNPLNSFSLIRRMNRDWIIWQLYMDDPVGISQVERIQEL--RE 130
            :..:.....|.::||.....|..:|:|.:.|.:|:..||...:..|....|...:.|:::.  ||
  Fly    61 KARLREFENERNEAREWGPSYFESPINKYLLNKRLTVDWQRVENLMATSTGEKPLTRLRKFRNRE 125

  Fly   131 HMPTHTDVEEAVTALDRIQSTYGLKVPEISHGFLNGKQYNVSLTVLDTYAMGQILFDQKNYLAAA 195
            .||...::|.|:..|.|:|..|.||..:::.|.|:|..|...|.......:.::....::...|.
  Fly   126 TMPDKKELEGAIDGLLRLQYVYRLKAKDLARGILDGVDYGTQLNSEHCVDIARLALRDQHPRLAH 190

  Fly   196 SWIYQSVVLMEAF--------------SMAAPLEISKNEVRMVYAETLLKLN------------- 233
            ||      |:||.              .:.|.|..:|.|:     |....||             
  Fly   191 SW------LIEANDRLTGGEKEEQLKPQILALLVQAKKEL-----EDFRGLNDTYQELIGIQSAS 244

  Fly   234 -QHADALKVVNIALTDNPHDIKLLLKKSE--IETMIRTGTNNAP-PVKVQATGVPTAYQIGCRG- 293
             :||...:....||::     |.||.:|:  :|        :|| |.:.:..|...||.:.|.| 
  Fly   245 EEHAKNYETFLNALSE-----KALLNESKPILE--------HAPIPEEGEPVGEFQAYSLTCSGH 296

  Fly   294 -QFPPSADSKLYCLYNRTTSPFLILAPLKMELVGLDPYMVLYHDVLSPKEIKELQGMATPGLKRA 357
             :..|.....|.|.|...|.|||.:||||.|.:..||.:||||||:...||..::.:....|.||
  Fly   297 WRLTPKEQRHLRCGYVTETHPFLWIAPLKAEELFQDPLLVLYHDVIYQSEIDVIRKLTENRLMRA 361

  Fly   358 TVYQASSGRNEVVKTRTSKVAWFPDGYNPLTVRLNARISDMTGFNLYGSEMLQLMNYGLGGHYDQ 422
            |:  .|...:.|...|||:..:.|...:.:...::.|::|||..|:..:|..|..|||:||||.|
  Fly   362 TI--TSHNESVVSNVRTSQFTFIPVTAHKVLSTIDQRVADMTNLNMKYAEDHQFANYGIGGHYGQ 424

  Fly   423 HYDFFNKTNSNMTAMS----GDRIATVLFYLTDVEQGGATVFPNIRKAVFPQRGSVVMWYNLKDN 483
            |.|:|.:|..:...:|    |:|||||||||:||.|||.|.||.:|..:.|::.:...|:||..:
  Fly   425 HMDWFYQTTFDAGLVSSPEMGNRIATVLFYLSDVAQGGGTAFPQLRTLLKPKKYAAAFWHNLHAS 489

  Fly   484 GQIDTQTLHAACPVIVGSKWVCNKWIREREQIFSRPC 520
            |..|.:|.|.|||:|.|||||.|:||||.:|...|||
  Fly   490 GVGDVRTQHGACPIIAGSKWVQNRWIRENDQSDRRPC 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528 32/130 (25%)
TPR_11 179..250 CDD:290150 17/98 (17%)
TPR repeat 179..213 CDD:276809 6/47 (13%)
TPR repeat 218..248 CDD:276809 9/43 (21%)
P4Hc 339..510 CDD:214780 70/174 (40%)
CG9698NP_651806.2 P4Ha_N 28..159 CDD:285528 32/130 (25%)
P4Hc 345..516 CDD:214780 70/172 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461852
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28396
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 1 0.900 - - OOG6_100878
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
1211.810

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