DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaPV and CG31371

DIOPT Version :9

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_733375.2 Gene:CG31371 / 43626 FlyBaseID:FBgn0051371 Length:507 Species:Drosophila melanogaster


Alignment Length:537 Identity:135/537 - (25%)
Similarity:221/537 - (41%) Gaps:106/537 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LPV--RVLLTYQVLLLL-----LRQAKGEESHCTSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQ 65
            :||  .||...|:.||:     ...|:|||.       :..|||.|.||||.|.||...||::|:
  Fly     1 MPVVFSVLWLLQLFLLVESVAGANFARGEEQ-------LQALLDTETQLIDGLRDYIERLERQLE 58

  Fly    66 TVRRSITSLRLENDKARSSTEEYLSNPLNSFSLIRRMNRDWIIWQLYMDDPVGISQV-------- 122
            .:||..:::. |......|.|||:.||||.|.:::|....|          .|:.|.        
  Fly    59 EIRRETSAIE-EIHSQVDSVEEYMGNPLNVFGILKRFESVW----------PGLEQKANATLEMV 112

  Fly   123 --ERIQELREHMPTHTDVEEAVTALDRIQSTYGLKVPEISHGFLNGKQYNVSLTVLDTYAMGQIL 185
              ||:.:.:..:|:..|.||::..|..:||.|.|....:|.|.:||.:...|::..|...:.:  
  Fly   113 FGERLSDRQLTLPSEEDYEESLNHLLHLQSVYELDSNSLSLGVVNGFKLGSSMSWGDCLEVAR-- 175

  Fly   186 FDQKNYLAAASWIYQSV-VLMEAFSMAAPLEISKNEVRMVYAETLLKLNQHADALK--------- 240
              :.::..|..|:..:: .|..|...:...:..:...|:...|..|.:...|..|.         
  Fly   176 --KSDFPVARFWLESALEKLPSASENSTESQRERESGRVHILEATLNIEYRAGELSRALATAEEL 238

  Fly   241 VVNIALTDNPHDIKLLLKKSEIETMIRTGTNNAPPVKVQATGVPTAYQIG--CRG--QFPPSADS 301
            ::.:.:.......|..::|:..:..:..|.......|.|.:.......|.  |||  |...:...
  Fly   239 LLLLPMNQGIQKAKRKIEKAMAKKELPKGRGQKSKAKKQISKSTEQLLIEEICRGAKQQVTTGSR 303

  Fly   302 KLYCLYNRTTSPFLILAPLKMELVGLDPYMVLYHDVLSPKEIKEL----------QGMATPGLKR 356
            ..:|..: .:||:|:|.|.::|.|..|||:||:||||:|||..||          :|::...||.
  Fly   304 FNHCQLD-GSSPWLLLQPSRLEPVSSDPYIVLHHDVLTPKESNELLQLIDEEEDTKGVSYQSLKL 367

  Fly   357 ATVYQASSGRNEVVKTRTSKVAWFPDGYNPLTVRLNARISDMTGFNLYGSEMLQLMNYGLGGHYD 421
            :.:.|...|                            |||     .|.|.|:|:|..:....|..
  Fly   368 SKLAQKKLG----------------------------RIS-----RLLGLEILELDPWTGRRHGH 399

  Fly   422 QHYDFFNKTNSNMTAMSGDRIATVLFYLTDVEQGGATVFPNIRKAVFPQRGSVVMWYNLKDNG-- 484
            :|......::..      ..:|.::..|.....|||.|||.:..||...|||::.|......|  
  Fly   400 EHITKLEHSSEL------KHVARLMLNLQAPGMGGAVVFPQLELAVNVPRGSLLHWRTRFAGGSS 458

  Fly   485 -QIDTQTLHAACPVIVG 500
             :.|.::..|.|||::|
  Fly   459 SEWDYRSGQAICPVLLG 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528 43/138 (31%)
TPR_11 179..250 CDD:290150 9/80 (11%)
TPR repeat 179..213 CDD:276809 4/34 (12%)
TPR repeat 218..248 CDD:276809 5/38 (13%)
P4Hc 339..510 CDD:214780 41/175 (23%)
CG31371NP_733375.2 P4Ha_N 30..156 CDD:285528 44/143 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461754
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391515at2759
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
76.850

Return to query results.
Submit another query.