DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaPV and PH4alphaMP

DIOPT Version :9

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster


Alignment Length:524 Identity:176/524 - (33%)
Similarity:278/524 - (53%) Gaps:20/524 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VLLTYQVLLLLLRQAKGEESHCTSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRL 76
            :||...||.|:|:.........:|.:|:.||.:.|..|:..|::|..|:.:..:.::..|.::|:
  Fly     1 MLLAKCVLFLVLQVLSCHGEFFSSTSGLAKLFETEVVLLAELQNYVNEINQHAEALQSEIDAIRV 65

  Fly    77 ENDKARSSTEEYLSNPLNSFSLIRRMNRDWIIWQ-LYMDDPVGISQVERIQELREHM--PTHTDV 138
            |:..|....::||:||:|:|.||:|::.||..:: ....|....:.::.:..|:|::  |:..|.
  Fly    66 EHLNAADGIDDYLNNPVNAFRLIKRLHSDWETFEGSVTADSSRSNYLDTMASLKENLSFPSQDDF 130

  Fly   139 EEAVTALDRIQSTYGLKVPEISHGFLNGKQYNVSLTVLDTYAMGQILFDQKNYLAAASWIYQSVV 203
            ..:..||.|:|.||.|.|.|::.|.|||.:|..:::..|.:.:||.|:..::|.....|:.||:.
  Fly   131 VGSAIALTRLQQTYQLDVAELASGILNGVKYGTAMSWQDCFVLGQHLYALRDYNHTVPWLQQSMQ 195

  Fly   204 LMEAFSMAAPLEISKNEVRMVYAETLLKLNQHADALKVVNIALTDNPHDIKLLLK-KSEIETMIR 267
            |:...|..:  |.:..:......|...::..|..||.:||..|:..|.....||: :.::|.:|.
  Fly   196 LLGEQSYGS--ESASLDFMEAVVEYHREMGAHESALSLVNHVLSIEPDQRSHLLEARQQLEELIT 258

  Fly   268 TGTNNA-------PPVKVQATGVPTAYQIGCRGQFP--PSADSKLYCLYNRTTSPFLILAPLKME 323
            .|..|.       .|.....:.....|:..|||:..  ||....|.|   |.....|..||.|:|
  Fly   259 DGDKNGLLHLTARRPGDYHESREFRMYEQVCRGELAPLPSKQRNLRC---RLRKSRLGYAPFKLE 320

  Fly   324 LVGLDPYMVLYHDVLSPKEIKELQGMATPGLKRATVYQ-ASSGRNEVVKTRTSKVAWFPDGYNPL 387
            .:.|||.:|..|.|:..|:...||..|.|.:||:|||. ..:|.:.....|||:.|.|....|..
  Fly   321 ELHLDPLVVQLHQVIGSKDSDSLQKTARPRIKRSTVYSLGGNGGSTAAAFRTSQGASFNYSRNAA 385

  Fly   388 TVRLNARISDMTGFNLYGSEMLQLMNYGLGGHYDQHYDFFNKTNSNMTA-MSGDRIATVLFYLTD 451
            |..|:..:.|.:|.|:..:|.||:.|||:||||:.|:|.|.:.:..... :.|:|:||.::||.|
  Fly   386 TKLLSRHVGDFSGLNMDYAEDLQVANYGIGGHYEPHWDSFPENHIYQEGDLHGNRMATGIYYLAD 450

  Fly   452 VEQGGATVFPNIRKAVFPQRGSVVMWYNLKDNGQIDTQTLHAACPVIVGSKWVCNKWIREREQIF 516
            ||.||.|.||.:...|.|:|||::.||||..:|..|.:|.||||||:.||||:.|.|||||.|..
  Fly   451 VEAGGGTAFPFLPLLVTPERGSLLFWYNLHPSGDQDFRTKHAACPVLQGSKWIANVWIRERNQDN 515

  Fly   517 SRPC 520
            .|||
  Fly   516 VRPC 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528 39/131 (30%)
TPR_11 179..250 CDD:290150 17/70 (24%)
TPR repeat 179..213 CDD:276809 9/33 (27%)
TPR repeat 218..248 CDD:276809 7/29 (24%)
P4Hc 339..510 CDD:214780 73/172 (42%)
PH4alphaMPNP_524594.2 P4Ha_N 24..156 CDD:285528 39/131 (30%)
P4Hc 336..509 CDD:214780 73/172 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461822
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

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