DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaPV and CG18233

DIOPT Version :10

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster


Alignment Length:501 Identity:170/501 - (33%)
Similarity:281/501 - (56%) Gaps:35/501 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 HCTSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRLENDKARSSTEEYLSNPLNSF 96
            :.:||.|:||||.:|.:.:.|...||..|::|:..:...:.:|:..|.|..:..|:::|||||:|
  Fly    31 YSSSVLGLVKLLKMEQEFMVNFSIYANILQEKVDNLNIFLDALKRPNHKTHNEREKFVSNPLNAF 95

  Fly    97 SLIRRMNRDWIIWQLYMDDPVGISQVERIQELREHMPTHTDVEEAVTALDRIQSTYGLKVPEISH 161
            .||||:|:||...|.|...|:|:.|:..:|::....|...|:.|.:.|:.||::||.|:..:|:.
  Fly    96 GLIRRLNQDWPKLQNYTQKPLGLEQLTAMQDIVSAAPESFDMNEKLKAMHRIETTYDLQPKDIAK 160

  Fly   162 GFLNGKQYNVSLTVLDTYAMGQILFDQKNYLAAASWIYQSVVLMEAFSMAAPLEISKNEVRMV-- 224
            |.|...::|..|...|..|:....|:...:..:..|..:::.|    |....||| .|.::.:  
  Fly   161 GLLQRTEFNYRLLFRDCLALAYHKFEIGEFKRSLLWFQEALKL----STDGSLEI-MNRLKEIEL 220

  Fly   225 --YAETLLKLNQHADALKVVNIALTDNPH----DIKLLLKKSEIETMIRTGTNNAPPVKVQATGV 283
              :|..:.|.:.:.....:.|..:.|..:    |.||:..:..|.:.::...|:      .:|..
  Fly   221 KGFATAVAKRSIYLSNQGLTNETIDDMANSQLQDAKLMDLEQLISSELKQWIND------DSTTP 279

  Fly   284 PTAYQIGCRGQFPPSADSKLYCLYNRTTSPFLILAPLKMELVGLDPYMVLYHDVLSPKEIKELQG 348
            ||.:.:||||.||..  |.|.|.||.:|:.||.|||||||.:..|||:|::|:|:|.|:|:|::|
  Fly   280 PTDHNLGCRGLFPKK--SNLVCRYNSSTNAFLKLAPLKMEEISRDPYIVMFHEVISDKDIEEMKG 342

  Fly   349 MATPGLKRATVYQASSGRNEVVKTRTSKVAWFPDGYNPLTVRLNARISDMTGFNLYGSEMLQLMN 413
            ..|   :....:.:.....|:|    |:|.|... .:..:.|:|.||||||||.|.....:||.|
  Fly   343 EIT---EMENGWTSLGDPKEIV----SRVYWIRK-ESSFSKRINQRISDMTGFKLEEFPAIQLAN 399

  Fly   414 YGLGGHYDQHYDFF----NKTNSNMTAMSGDRIATVLFYLTDVEQGGATVFPNIRKAVFPQRGSV 474
            :|:||::..||||:    .:.:.|.|.  ||||.:::||..:|.|||.||||:::.||.|::|:.
  Fly   400 FGVGGYFKPHYDFYTDRLKEVDVNNTL--GDRIGSIIFYAGEVSQGGQTVFPDLKVAVEPKKGNA 462

  Fly   475 VMWYNLKDNGQIDTQTLHAACPVIVGSKWVCNKWIREREQIFSRPC 520
            :.|:|..|:...|.::||:.|||:|||:|...||:....|:|.:||
  Fly   463 LFWFNAFDDSTPDPRSLHSVCPVLVGSRWTITKWLHYAPQLFVKPC 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..166 CDD:462433 48/130 (37%)
NrfG 179..>256 CDD:443378 15/84 (18%)
TPR repeat 179..213 CDD:276809 5/33 (15%)
TPR repeat 218..248 CDD:276809 4/33 (12%)
P4Hc 339..510 CDD:214780 67/174 (39%)
CG18233NP_649044.3 P4Ha_N 34..164 CDD:462433 47/129 (36%)
P4Hc 333..498 CDD:214780 67/174 (39%)

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