DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaPV and CG18234

DIOPT Version :9

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster


Alignment Length:507 Identity:168/507 - (33%)
Similarity:262/507 - (51%) Gaps:51/507 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRLENDKARSSTEEYLSNPLNSFSLI 99
            |:|||.:|:|||...|..:|.|...|:.|:..:...:..::.:.:.:|.:.||::::|||:||||
  Fly    27 SIAGMKELVDLEGFFISEMESYTAALKNKIDLMESLLQEVQSKREISRRNPEEFVAHPLNAFSLI 91

  Fly   100 RRMNRDWIIWQLYMDDPVGISQVERIQE-LREHMPTHTDVEEAVTALDRIQSTYGLKVPEISHGF 163
            ||::.||...:|.|.:.||:..::.|:. |.|..|:..|:.:|:..:..:|..|.|:..:|::|.
  Fly    92 RRLHEDWTQAELLMLNQVGLEHLQAIETGLEEAQPSDNDLNDAIGGIISLQQFYNLQPSDIANGL 156

  Fly   164 LNGKQYNVSLTVLDTYAMGQ--ILFDQKNYLAAASWIYQSV----------VLMEAFSMAAPLEI 216
            |.|:|||.|||.|:..|:..  :.|:...|  |.:|...:|          |..|.|....|   
  Fly   157 LMGQQYNASLTTLNCQALANACMNFNYDKY--ALNWFKAAVDHYNDDRDGQVYREVFDFRLP--- 216

  Fly   217 SKNEVRMVYAETLLKLNQHADALKVV-NIALTDNPHDIKLLLKKSEIETMIRTGTNNAPPVKVQA 280
               ::.:.|...|:.......|.||: ::|    ..|..|.|.:.:|   ...|..:.|......
  Fly   217 ---DLYINYTSVLVTKGFRKAAWKVLQDVA----DLDATLWLLRKDI---YEVGKIDVPDPTFII 271

  Fly   281 TGVPTAYQIGCR--GQFPPSADSKLYCLYNRTTSPFLILAPLKMELVGLDPYMVLYHDVLSPKEI 343
            |  |.....||.  ||    ....|.|.|.:.||.||.:||||:|.:.|.|::||||||:...||
  Fly   272 T--PWFDVTGCLRVGQ----TSQHLSCHYEKNTSEFLRIAPLKVETLSLKPHIVLYHDVIYDSEI 330

  Fly   344 KELQGMATPGLKR-ATVYQASSGRNEVVKTRTSKVAWFPDGYNPLTVRLNARISDMTGFNLYGSE 407
            .:::.::.|.||. ..:..|.....:..|.|       .|..:||::    ||.||||.::....
  Fly   331 SKVKNISLPSLKSPLRILYAIDYNLKFAKIR-------EDHQSPLSL----RIKDMTGEDVQEDT 384

  Fly   408 MLQLMNYGLGGHYDQHYDFFNKTNSNMTAMSGDRIATVLFYLTDVEQGGATVFPNIRKAVFPQRG 472
            ..|:.|||:.|..:.|.|  |....:.||..|||:.:::|::.||.||||..|||:...::||:|
  Fly   385 DFQIDNYGICGFRNFHTD--NIELQDQTAELGDRLTSIMFFMNDVAQGGALAFPNLNLTIWPQKG 447

  Fly   473 SVVMWYNLKDNGQIDTQTLHAACPVIVGSKWVCNKWIREREQIFSRPCLKKR 524
            |.::|.||....|.:...||.:|||:|||||...||:.||.|:|||||...|
  Fly   448 SALVWRNLDHRMQPNQDLLHVSCPVVVGSKWTLVKWLHERPQMFSRPCTTGR 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528 42/129 (33%)
TPR_11 179..250 CDD:290150 16/83 (19%)
TPR repeat 179..213 CDD:276809 9/45 (20%)
TPR repeat 218..248 CDD:276809 6/30 (20%)
P4Hc 339..510 CDD:214780 60/171 (35%)
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528 42/129 (33%)
P4Hc <371..485 CDD:214780 49/115 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461926
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.900

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