DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaPV and CG18749

DIOPT Version :9

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_001027154.1 Gene:CG18749 / 3771984 FlyBaseID:FBgn0042182 Length:491 Species:Drosophila melanogaster


Alignment Length:500 Identity:186/500 - (37%)
Similarity:272/500 - (54%) Gaps:53/500 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EESHCTSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRLENDKARSSTEEYLSNPL 93
            ::|:..|...::|||::|.:|:|||:.|...|:.|...:.||:..:..||.:.:|..|.||.|||
  Fly    29 KKSYAASTMELMKLLEVEDELVDNLKGYVKTLKMKFNLMERSLIDMSRENMEMKSDYESYLGNPL 93

  Fly    94 NSFSLIRRMNRDWIIWQLYM----DDPVGISQVERIQELREHMPTHTDVEEAVTALDRIQSTYGL 154
            |||.||.|::..|..|..|.    ::.:|  .:|..:.:|:.:||.:|:::|...:..:...|.|
  Fly    94 NSFRLIHRLHTSWRKWYQYAIKVENNALG--HIENARLMRKMLPTSSDLQQACRGIHDLMYFYDL 156

  Fly   155 KVPEISHGFLNG-KQYNVSLTVLDTYAMGQI-LFDQKNYLAAASWIYQSVVLMEAFSMAAPLEIS 217
            |..|::.|.|.| .|....||..|..|:|:. :.:||:.||.| |...|:...:..       |.
  Fly   157 KPEELAAGNLAGYSQPGTGLTAYDCLALGEFGVQNQKDDLAEA-WYNLSLTRFDNI-------IE 213

  Fly   218 KNEVRMVYAETLLKLNQHADALKVVNIALTDNPHDIKLLLKKSEIETMIRTGTNNAPPVKVQATG 282
            |.:|...:|..|.|..|..:|.:    ...:.|..|....:....|.::.| |.|...| ||   
  Fly   214 KYQVHKAWALLLAKNKQLTEAFQ----HFENKPEGIVASNEVIHFEGVLAT-TQNCTAV-VQ--- 269

  Fly   283 VPTAYQIGCRGQFPPSADSKLYCLYNRTTSPFLILAPLKMELVGLDPYMVLYHDVLSPKEIKELQ 347
                         .||  .||:|.||.:|:||..:||||||.:|||||||::|||:...||..:.
  Fly   270 -------------KPS--KKLHCRYNTSTTPFTRIAPLKMEELGLDPYMVVFHDVIYDTEIDGML 319

  Fly   348 GMATPGLKRATVYQASSGRNEVVKTRTSKVAWFPDGYNPLTVRLNARISDMTGFNLYGSEMLQLM 412
            ..:..||..:    .|..::||   ||||.:...|...     ||.|::||||.::..|:...|:
  Fly   320 NSSDFGLSES----VSGLKSEV---RTSKDSHIVDAKT-----LNERVTDMTGLSMEMSDPFSLI 372

  Fly   413 NYGLGGHYDQHYDFFNKTNSNMTAMSGDRIATVLFYLTDVEQGGATVFPNIRKAVFPQRGSVVMW 477
            |||||||:..|:||...||:. ....|||||||||||.:|:.|||||||.:...|.|::||.|.|
  Fly   373 NYGLGGHFILHHDFHEYTNTT-RLKQGDRIATVLFYLREVDSGGATVFPMLNITVMPKKGSAVFW 436

  Fly   478 YNLKDNGQIDTQTLHAACPVIVGSKWVCNKWIREREQIFSRPCLK 522
            |||.::|.::::|||.|||||.|||:|..|||.|..|:|..||:|
  Fly   437 YNLHNSGAVNSKTLHTACPVISGSKYVLTKWINELPQMFVTPCMK 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528 44/132 (33%)
TPR_11 179..250 CDD:290150 17/71 (24%)
TPR repeat 179..213 CDD:276809 9/34 (26%)
TPR repeat 218..248 CDD:276809 7/29 (24%)
P4Hc 339..510 CDD:214780 76/170 (45%)
CG18749NP_001027154.1 P4Ha_N 35..166 CDD:285528 44/132 (33%)
P4Hc 314..468 CDD:214780 75/166 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461770
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.890

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