DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaPV and p4ha2

DIOPT Version :9

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_005173949.1 Gene:p4ha2 / 373132 ZFINID:ZDB-GENE-030827-1 Length:542 Species:Danio rerio


Alignment Length:524 Identity:183/524 - (34%)
Similarity:288/524 - (54%) Gaps:48/524 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 TSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRLENDK-ARSST---EEYLSNPLN 94
            ||:..|..|:..|.:|:.:|::|....|:||:|||.....|    || .|:||   |.:|::|:|
Zfish    24 TSIGQMTNLIFTERELVQSLKEYIQAEEQKLETVRSWANKL----DKLTRTSTSDPEGFLAHPVN 84

  Fly    95 SFSLIRRMNRDWI-IWQLYMDDPVGISQVERIQELREHMPTHTDVEEAVTALDRIQSTYGLKVPE 158
            ::.|::|:|.:|. :..|.:.|| ....:..:...|::.|...|.:.|..||.|:|.||.|....
Zfish    85 AYKLMKRLNTEWSELESLVLQDP-SDGFISNMSVHRQYFPDEEDEKGAAKALLRLQDTYKLDAES 148

  Fly   159 ISHGFL------NGKQYNVSLTVLDTYAMGQILFDQKNYLAAASWIYQSVVLMEAFSMAAPLEIS 217
            .|.|.|      :|.:||..|||.|.:.||::.::..:|..:..|:.||:..|::...|   :..
Zfish   149 FSKGKLPGQRQHSGVRYNALLTVDDCFDMGKMAYNDNDYYHSVLWMQQSLRQMDSGEEA---KTP 210

  Fly   218 KNEVRMVYAETLLKLNQHADALKVVNIALTDNP-HD--------IKLLLKKSEIETMIRTGTNNA 273
            |.:|....:.::.::.....|:::....|..:| |.        .:.||.| |::...:|....|
Zfish   211 KADVLDYLSYSVYQMGDLPRAIELTRRLLAIDPSHQRAGGNLRYFERLLSK-ELQDSGQTQPEPA 274

  Fly   274 P--PVKVQATGVP-------TAYQIGCRGQ---FPPSADSKLYCLY---NRTTSPFLILAPLKME 323
            .  |:::.....|       .||:..|||:   ......|:|:|.|   ||  :|.|:|.|:|.|
Zfish   275 DERPIQLDTYQRPKDYLPEREAYEALCRGEGVKMTTKRQSRLFCRYRDGNR--NPRLLLKPMKEE 337

  Fly   324 LVGLDPYMVLYHDVLSPKEIKELQGMATPGLKRATVYQASSGRNEVVKTRTSKVAWFPDGYNPLT 388
            .....|::|.:.:.||.:||::::.:|||.|.||||....:|...|...|.||.||.....:|:.
Zfish   338 DEWDSPHIVRFLEALSDEEIQKIKEIATPKLARATVRDPKTGVLTVAHYRVSKSAWLEGEDDPVI 402

  Fly   389 VRLNARISDMTGFNLYGSEMLQLMNYGLGGHYDQHYDFFNKTNSN--MTAMSGDRIATVLFYLTD 451
            .|:|.||.|:||..:..:|:||:.|||:||.|:.|:||..|...:  .:..:|:|:||.|.|::|
Zfish   403 ARVNQRIEDITGLTVDTAELLQVANYGVGGQYEPHFDFSRKDEPDAFKSLGTGNRVATYLNYMSD 467

  Fly   452 VEQGGATVFPNIRKAVFPQRGSVVMWYNLKDNGQIDTQTLHAACPVIVGSKWVCNKWIREREQIF 516
            ||.|||||||:...:|:|::|:.|.||||..:|:.|.:|.||||||:||||||.||||.||.|.|
Zfish   468 VEAGGATVFPDFGASVWPRKGTAVFWYNLFRSGEGDYRTRHAACPVLVGSKWVSNKWIHERGQEF 532

  Fly   517 SRPC 520
            .|||
Zfish   533 RRPC 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528 43/133 (32%)
TPR_11 179..250 CDD:290150 12/70 (17%)
TPR repeat 179..213 CDD:276809 8/33 (24%)
TPR repeat 218..248 CDD:276809 4/29 (14%)
P4Hc 339..510 CDD:214780 81/172 (47%)
p4ha2XP_005173949.1 P4Ha_N 25..154 CDD:285528 43/133 (32%)
P4Hc 353..526 CDD:214780 81/172 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100878
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.820

Return to query results.
Submit another query.