DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaPV and PH4alphaNE3

DIOPT Version :9

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster


Alignment Length:480 Identity:174/480 - (36%)
Similarity:265/480 - (55%) Gaps:37/480 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRLENDKARSSTEEYLSNPLNSFSLIRRMNRDW 106
            |:.|:.:|||||.:||.::::|...::|....||.....|:...||||.|||:||.|||.|.:||
  Fly    27 LMQLDVELIDNLMNYAEKIDEKASQLKRLAQELRQPLHSAKGREEEYLGNPLHSFPLIRHMYQDW 91

  Fly   107 IIWQLYMDDPVGISQVERIQELREHMPTHTDVEEAVTALDRIQSTYGLKVPEISHGFLNGKQYNV 171
            ...:.:|..|||..:::.::.....:|...|.|||..::.||..|||:...::::|.::..::|.
  Fly    92 RYLEEFMKKPVGEEEIQFLRRKLPELPWQVDTEEASVSIFRIAETYGMMPWDMANGLIDNVRFNS 156

  Fly   172 SLTVLDTYAMGQILFDQKNYLAAASWIYQSVVLM-EAFS-MAAPLEISKNEVRMVYAETLLKLNQ 234
            :|..||.:.:.::.|....:..|..||..|...| |.:| :...|.:::.:|.::.|..|::|::
  Fly   157 TLPALDCFEVAKMYFKWGYFKQALQWITISKARMKEEYSGVYEVLGMNRQDVALLQARCLVELDR 221

  Fly   235 HADALKVVNIALTDNP----HDIKLL--LKKSEIETMIRTGTNNAPPVKVQATGVPTAYQIGCRG 293
            ..:|.:|    |.|.|    :.|.||  .|.:..|.:     :::|.       :...|:..||.
  Fly   222 RDEAHEV----LLDQPDLADNSISLLDQFKANPYEAI-----DSSPK-------LGEGYKRLCRS 270

  Fly   294 QFPPSADSKLYCLYNRTTSPFLILAPLKMELVGLDPYMVLYHDVLSPKEIKELQGMATPGLKRAT 358
            .|.|: .|||:|.||.|||.||||||||||.:.|:|::|:|||:|..|:|::|..:|.|.||...
  Fly   271 SFSPN-PSKLHCRYNSTTSAFLILAPLKMEEISLEPHIVVYHDILPDKDIQQLITLAEPLLKPTE 334

  Fly   359 VYQASSGRNEVVKT-RTSKVAWFPDGYNPLTVRLNARISDMTGFNLYGSEMLQLMNYGLGGHYDQ 422
            ::  ...:||...: ||      |.| .||...|..|:.|:||..:.....:.::.||.|..|..
  Fly   335 MF--DDNKNEARSSYRT------PLG-GPLLDSLTQRMRDITGLQIRQGNPINIIKYGFGAPYTN 390

  Fly   423 HYDFFNKTNSNMTAMSGDRIATVLFYLTDVEQGGATVFPNIRKAVFPQRGSVVMWYNLK-DNGQI 486
            :||||.|.||..... |||:||.:|||.|...|||||||.:...|..:||.|:.||||. |...:
  Fly   391 YYDFFKKRNSESKGF-GDRMATFMFYLNDAPYGGATVFPRLNVKVPAERGKVLFWYNLNGDTHDM 454

  Fly   487 DTQTLHAACPVIVGSKWVCNKWIRE 511
            :..|:||||||..|||||...||.|
  Fly   455 EPTTMHAACPVFHGSKWVMTAWIHE 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528 44/121 (36%)
TPR_11 179..250 CDD:290150 17/72 (24%)
TPR repeat 179..213 CDD:276809 8/35 (23%)
TPR repeat 218..248 CDD:276809 7/29 (24%)
P4Hc 339..510 CDD:214780 69/172 (40%)
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528 44/121 (36%)
P4Hc 316..478 CDD:214780 69/171 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461769
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28396
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
1110.910

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