DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaPV and PH4alphaSG1

DIOPT Version :10

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster


Alignment Length:539 Identity:165/539 - (30%)
Similarity:264/539 - (48%) Gaps:55/539 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VLLLLLRQAKGEESHCTSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSL-RLENDKA 81
            ::|.||........:.::::.:.:|||:||.:::..::|....:::.:.::|.:..: ..:||  
  Fly     6 IILSLLCVFPVNGDYYSAISELERLLDVEAFIVEKFDEYLERAQQEQENLKRFLDQIDEQQND-- 68

  Fly    82 RSSTEEYLSNPLNSFSLIRRMNRDWIIWQLYMDDPVGISQ---------VERIQELREHMPTHTD 137
            |...|||..||:|:|..|:|:..|   |:..:.|||..|.         .:.::::....||..|
  Fly    69 RGDLEEYFGNPINAFITIKRLVHD---WKFNVFDPVFDSSNFETYKNNLSDSLEKINFKGPTQED 130

  Fly   138 VEEAVTALDRIQSTYGLKVPEISHGFLNGKQYN---VSLTVLDTYAMGQILFDQKNYLAAASWIY 199
            :..|..||.|:|:.|.|....::.|.|:..:.|   .||:..|.:.:|:.|.:.|.|...:.|  
  Fly   131 LHGATRALLRLQNMYQLNTDHLASGVLHPGEKNALGTSLSASDCFELGKNLCEIKEYSYGSEW-- 193

  Fly   200 QSVVLMEAFSM--AAPLE-ISKNEVRMVYAETL---------LKLNQHADALKVVNIALTDNPHD 252
                |:||...  ..||. ||.|...:...|.|         |||     |.|:.|..|...|..
  Fly   194 ----LLEARKRLHGKPLGFISPNVSDVEILEHLSSAFNGLGNLKL-----AYKLNNEILDKKPDH 249

  Fly   253 IKLLLKKSEIETMIRTGTNNAPPVKVQATGVP--------TAYQIGCRGQF--PPSADSKLYC-L 306
            .:.|..|...|..:....:.||..:|:...:.        ..|...|||:.  .|.....|.| |
  Fly   250 EEALKNKILYEGQLARERSFAPRKQVELPQIAEKEQKESYKLYTQVCRGELHQSPREQRNLRCWL 314

  Fly   307 YNRTTSPFLILAPLKMELVGLDPYMVLYHDVLSPKEIKELQGMATPGLKRATVYQASSGRNEVVK 371
            |::.. |:..|:|.|:|.:.:|||:...|:||...||..:.......::|:.|.|:.:.....| 
  Fly   315 YHQGV-PYYRLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMERSKVGQSENSTTSEV- 377

  Fly   372 TRTSKVAWFPDGYNPLTVRLNARISDMTGFNLYGSEMLQLMNYGLGGHYDQHYDFFNKTNSNMTA 436
             |.|:..|.....||...::..|:.|:||.:...:|.|||:|||:||.|:.|:||......::.:
  Fly   378 -RISRNTWLWYDANPWLSKIKQRLEDVTGLSTESAEPLQLVNYGIGGQYEPHFDFVEDDGQSVFS 441

  Fly   437 MSGDRIATVLFYLTDVEQGGATVFPNIRKAVFPQRGSVVMWYNLKDNGQIDTQTLHAACPVIVGS 501
            ..|:|:.|.||||.||..||||.||.:|.||.|.:||:::||||..:...|.:|.||.|||:.||
  Fly   442 WKGNRLLTALFYLNDVALGGATAFPFLRLAVPPVKGSLLIWYNLHSSTHKDFRTKHAGCPVLQGS 506

  Fly   502 KWVCNKWIREREQIFSRPC 520
            ||:||:|.....|.|.|||
  Fly   507 KWICNEWFHVGAQEFRRPC 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..166 CDD:462433 37/140 (26%)
NrfG 179..>256 CDD:443378 23/88 (26%)
TPR repeat 179..213 CDD:276809 8/35 (23%)
TPR repeat 218..248 CDD:276809 10/38 (26%)
P4Hc 339..510 CDD:214780 67/170 (39%)
PH4alphaSG1NP_733376.1 P4Ha_N 23..159 CDD:462433 37/140 (26%)
P4Hc 347..515 CDD:214780 67/169 (40%)

Return to query results.
Submit another query.