DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaPV and CG31013

DIOPT Version :10

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_733394.3 Gene:CG31013 / 326111 FlyBaseID:FBgn0051013 Length:534 Species:Drosophila melanogaster


Alignment Length:524 Identity:227/524 - (43%)
Similarity:321/524 - (61%) Gaps:19/524 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VLLTYQVLLLLLRQAKGEESHCTSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRL 76
            |:|.:..|:|..|..  |:||..|:..||.||:||.:||||||:|...||:||:.:|..:..:|.
  Fly    10 VMLFHSTLVLGHRPL--EKSHSLSLVTMVPLLELEKKLIDNLENYTNALEQKLEIIRSQLLVIRA 72

  Fly    77 ENDKARSSTEEYLSNPLNSFSLIRRMNRDWIIWQLYMDDPVGISQVERIQELREHMPTHTDVEEA 141
            ||:|.|.:...|||||||.||:|||:::|||.|:.||:.||||.|::.....::.:||..|:.:|
  Fly    73 ENEKGRRNAISYLSNPLNGFSIIRRLHQDWINWRKYMEQPVGIWQLKAFYSWKDELPTERDLWDA 137

  Fly   142 VTALDRIQSTYGLKVPEISHGFLNGKQYNVSLTVLDTYAMGQILFDQKNYLAAASWIYQSVVLME 206
            ...:.||||||.|||.:..:|.:||||||.|::..|..::|..||.:.....|..|:.:....::
  Fly   138 CEGIARIQSTYDLKVGDFINGNINGKQYNDSMSTADILSVGAYLFMKNRPSDAIQWLQEVPQRLQ 202

  Fly   207 AFSMAAP--LEISKNEVRMVYAETLLKLNQHADALKVVNIALTDNPHDIKLLLKKSEIETMIRTG 269
            ...:..|  |.|.:.:...:.||..:|...:::||.:::..|...|||.::|....:....|...
  Fly   203 EELLIQPRHLPIKEVDALRLLAEAQIKDQNYSEALPLLHNCLKLQPHDARVLRLWKKTTDFIENQ 267

  Fly   270 TNNAPPV-KVQATGVPTAYQIGCRGQFPPSADSKLYCLYNRTTSPFLILAPLKMELVGLDPYMVL 333
            .:.:|.. |.:...:..|:::.|.|  |..:.::|:|.||.||:|||.|||||.|.:|||||:||
  Fly   268 PDQSPTENKKRNVPIANAFKLSCNG--PLESSTRLHCFYNFTTTPFLRLAPLKTEQIGLDPYVVL 330

  Fly   334 YHDVLSPKEIKELQGMATPGLKRATVY--QASSGRNEVVKTRTSKVAWFPDGYNPLTVRLNARIS 396
            ||:|||.:||..|.|.|...:|...::  :|...:|   :.||:|..|.....|.||.|:..||.
  Fly   331 YHEVLSAREISMLIGKAAQNMKNTKIHKERAVPKKN---RGRTAKGFWLKKESNELTKRITRRIM 392

  Fly   397 DMTGFNLYGSEMLQLMNYGLGGHYDQHYDFFNKTNSNMTAMS-------GDRIATVLFYLTDVEQ 454
            |||||:|..||..|::|||:||||..|.|:|:..:||.|...       ||||||||||||||||
  Fly   393 DMTGFDLADSEGFQVINYGIGGHYFLHMDYFDFASSNHTDTRSRYSIDLGDRIATVLFYLTDVEQ 457

  Fly   455 GGATVFPNIRKAVFPQRGSVVMWYNLKDNGQIDTQTLHAACPVIVGSKWVCNKWIREREQIFSRP 519
            ||||||.::...|.||.|:.:.||||..:|..|.:|.|||||||||||||..:||||:.|||.||
  Fly   458 GGATVFGDVGYYVSPQAGTAIFWYNLDTDGNGDPRTRHAACPVIVGSKWVMTEWIREKRQIFIRP 522

  Fly   520 CLKK 523
            ||.|
  Fly   523 CLPK 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..166 CDD:462433 61/130 (47%)
NrfG 179..>256 CDD:443378 17/78 (22%)
TPR repeat 179..213 CDD:276809 5/33 (15%)
TPR repeat 218..248 CDD:276809 6/29 (21%)
P4Hc 339..510 CDD:214780 88/179 (49%)
CG31013NP_733394.3 P4Ha_N 31..162 CDD:462433 61/130 (47%)
NrfG <181..256 CDD:443378 17/74 (23%)
TPR repeat 211..246 CDD:276809 8/34 (24%)
P4Hc 336..513 CDD:214780 88/179 (49%)

Return to query results.
Submit another query.