DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaPV and P4ha3

DIOPT Version :9

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_006508007.1 Gene:P4ha3 / 320452 MGIID:2444049 Length:551 Species:Mus musculus


Alignment Length:585 Identity:178/585 - (30%)
Similarity:274/585 - (46%) Gaps:131/585 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LLLLL------RQAKGEESHCTSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRLE 77
            ||.||      ..|.|.|...:::..:.:.|..|.:|:..|..|....|.:|:.:.|..      
Mouse     9 LLALLALGGDPAAATGREDTFSALTSVARALAPERRLLGTLRRYLRGEEARLRDLTRFY------ 67

  Fly    78 NDKARSSTEEY---LSNPLNSFSLIRRMNRDW--IIWQLYMDDPV-----GISQVERIQELREHM 132
             ||..|..|:.   :.|||.:|:||:|:..||  ::..|...:.:     |..:||      :.:
Mouse    68 -DKVLSLHEDLKIPVVNPLLAFTLIKRLQSDWRNVVHSLEATENIRALKDGYEKVE------QDL 125

  Fly   133 PTHTDVEEAVTALDRIQSTYGLKVPEISHGF-----------LNGKQYNVSLTVLDTYAMG---- 182
            |...|:|.|..||.|:|..|.|.|..::.|.           |...:...|||..|.:.:|    
Mouse   126 PAFEDLEGAARALMRLQDVYMLNVKGLARGVFQRVTGSSITDLYSPRQLFSLTADDCFQVGKPSC 190

  Fly   183 -----QILFDQKNYLAAASWIYQSVVLME---------------------AF------SMAAPLE 215
                 |:.:|..:|..|..|:.::|.|..                     ||      :::..|.
Mouse   191 GSRSLQVAYDTGDYYHAIPWLEEAVSLFRRAHGEWKTEDEASLEDALDYLAFACFQVGNVSCALS 255

  Fly   216 ISKNEVRMVY-------AETLLKLNQHADALKVVNIALTDNPHDIKLLLKKSEIETMIRTGTNNA 273
            :|:.  .:||       |..:||..:          .|.:|.|.:       ..||.|:  ..|.
Mouse   256 LSRE--FLVYSPDNKRMARNVLKYER----------LLAENGHQM-------AAETAIQ--RPNV 299

  Fly   274 PPVKVQAT---------GVPTAYQIGCRGQFPPSADSKLYCLYNRTTSPFLILAPLKMELVGLDP 329
            |.::.:.|         ..||.|||       ||    |||.|...:||:|:|.|.:.|:|.|.|
Mouse   300 PHLQTRDTYEGLCQTLGSQPTHYQI-------PS----LYCSYETNSSPYLLLQPARKEVVHLRP 353

  Fly   330 YMVLYHDVLSPKEIKELQGMATPGLKRATVYQASSGRNEV-VKTRTSKVAWFPDGYNPLTVRLNA 393
            .:.||||.:|.:|.::::.:|.|.|:|:.|   :||..:: |:.|.||.||..|..:|:.|.|:.
Mouse   354 LIALYHDFVSDEEAQKIRELAEPWLQRSVV---ASGEKQLQVEYRISKSAWLKDTVDPMLVTLDH 415

  Fly   394 RISDMTGFNLYG--SEMLQLMNYGLGGHYDQHYDFFNKTNSNMTAM-SGDRIATVLFYLTDVEQG 455
            ||:.:||.::..  :|.||::|||:||||:.|:|.....:|.:..| ||:|:||.:.||:.||.|
Mouse   416 RIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAG 480

  Fly   456 GATVFPNIRKAVFPQRGSVVMWYNLKDNGQIDTQTLHAACPVIVGSKWVCNKWIREREQIFSRPC 520
            |||.|.....:|...:.:.:.|:||..:|:.|..||||.|||:||.|||.||||.|..|.|.|||
Mouse   481 GATAFIYGNFSVPVVKNAALFWWNLHRSGEGDGDTLHAGCPVLVGDKWVANKWIHEYGQEFRRPC 545

  Fly   521  520
            Mouse   546  545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528 37/149 (25%)
TPR_11 179..250 CDD:290150 18/113 (16%)
TPR repeat 179..213 CDD:276809 10/69 (14%)
TPR repeat 218..248 CDD:276809 6/36 (17%)
P4Hc 339..510 CDD:214780 72/174 (41%)
P4ha3XP_006508007.1 P4Ha_N 31..157 CDD:369820 37/138 (27%)
P4Hc 363..535 CDD:214780 72/174 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839335
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.740

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