DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaPV and P4ha3

DIOPT Version :10

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_006508007.1 Gene:P4ha3 / 320452 MGIID:2444049 Length:551 Species:Mus musculus


Alignment Length:585 Identity:178/585 - (30%)
Similarity:274/585 - (46%) Gaps:131/585 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LLLLL------RQAKGEESHCTSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRLE 77
            ||.||      ..|.|.|...:::..:.:.|..|.:|:..|..|....|.:|:.:.|..      
Mouse     9 LLALLALGGDPAAATGREDTFSALTSVARALAPERRLLGTLRRYLRGEEARLRDLTRFY------ 67

  Fly    78 NDKARSSTEEY---LSNPLNSFSLIRRMNRDW--IIWQLYMDDPV-----GISQVERIQELREHM 132
             ||..|..|:.   :.|||.:|:||:|:..||  ::..|...:.:     |..:||      :.:
Mouse    68 -DKVLSLHEDLKIPVVNPLLAFTLIKRLQSDWRNVVHSLEATENIRALKDGYEKVE------QDL 125

  Fly   133 PTHTDVEEAVTALDRIQSTYGLKVPEISHGF-----------LNGKQYNVSLTVLDTYAMG---- 182
            |...|:|.|..||.|:|..|.|.|..::.|.           |...:...|||..|.:.:|    
Mouse   126 PAFEDLEGAARALMRLQDVYMLNVKGLARGVFQRVTGSSITDLYSPRQLFSLTADDCFQVGKPSC 190

  Fly   183 -----QILFDQKNYLAAASWIYQSVVLME---------------------AF------SMAAPLE 215
                 |:.:|..:|..|..|:.::|.|..                     ||      :::..|.
Mouse   191 GSRSLQVAYDTGDYYHAIPWLEEAVSLFRRAHGEWKTEDEASLEDALDYLAFACFQVGNVSCALS 255

  Fly   216 ISKNEVRMVY-------AETLLKLNQHADALKVVNIALTDNPHDIKLLLKKSEIETMIRTGTNNA 273
            :|:.  .:||       |..:||..:          .|.:|.|.:       ..||.|:  ..|.
Mouse   256 LSRE--FLVYSPDNKRMARNVLKYER----------LLAENGHQM-------AAETAIQ--RPNV 299

  Fly   274 PPVKVQAT---------GVPTAYQIGCRGQFPPSADSKLYCLYNRTTSPFLILAPLKMELVGLDP 329
            |.::.:.|         ..||.|||       ||    |||.|...:||:|:|.|.:.|:|.|.|
Mouse   300 PHLQTRDTYEGLCQTLGSQPTHYQI-------PS----LYCSYETNSSPYLLLQPARKEVVHLRP 353

  Fly   330 YMVLYHDVLSPKEIKELQGMATPGLKRATVYQASSGRNEV-VKTRTSKVAWFPDGYNPLTVRLNA 393
            .:.||||.:|.:|.::::.:|.|.|:|:.|   :||..:: |:.|.||.||..|..:|:.|.|:.
Mouse   354 LIALYHDFVSDEEAQKIRELAEPWLQRSVV---ASGEKQLQVEYRISKSAWLKDTVDPMLVTLDH 415

  Fly   394 RISDMTGFNLYG--SEMLQLMNYGLGGHYDQHYDFFNKTNSNMTAM-SGDRIATVLFYLTDVEQG 455
            ||:.:||.::..  :|.||::|||:||||:.|:|.....:|.:..| ||:|:||.:.||:.||.|
Mouse   416 RIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAG 480

  Fly   456 GATVFPNIRKAVFPQRGSVVMWYNLKDNGQIDTQTLHAACPVIVGSKWVCNKWIREREQIFSRPC 520
            |||.|.....:|...:.:.:.|:||..:|:.|..||||.|||:||.|||.||||.|..|.|.|||
Mouse   481 GATAFIYGNFSVPVVKNAALFWWNLHRSGEGDGDTLHAGCPVLVGDKWVANKWIHEYGQEFRRPC 545

  Fly   521  520
            Mouse   546  545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..166 CDD:462433 38/151 (25%)
NrfG 179..>256 CDD:443378 20/119 (17%)
TPR repeat 179..213 CDD:276809 10/69 (14%)
TPR repeat 218..248 CDD:276809 6/36 (17%)
P4Hc 339..510 CDD:214780 72/174 (41%)
P4ha3XP_006508007.1 P4Ha_N 31..158 CDD:462433 37/139 (27%)
P4Hc 363..535 CDD:214780 72/174 (41%)

Return to query results.
Submit another query.