DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaPV and C14E2.4

DIOPT Version :9

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_001359861.1 Gene:C14E2.4 / 182616 WormBaseID:WBGene00015773 Length:311 Species:Caenorhabditis elegans


Alignment Length:233 Identity:57/233 - (24%)
Similarity:92/233 - (39%) Gaps:65/233 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 LKMELVGLDPYMVLYHDVLSPKEI-----------------------------KELQGMATPGLK 355
            ::||::...|.:|:|.||.|.|::                             ::..|..||...
 Worm    81 VRMEILSWSPPLVIYRDVFSKKQVSDYLELLKNLKMNEQKVVRDDGEIAYSTYRQANGTITPAHS 145

  Fly   356 RATVYQASSGRNEVVKTRTSKVAWFPDGYNPLTVRLNARISDMTGFNLYGSEMLQLMNYGLGGHY 420
            .|   :|.|    ::.|.|..:..|...|                     :|.:..::|..||||
 Worm   146 HA---EAQS----LMDTATQLLPVFDFQY---------------------TEQISALSYIKGGHY 182

  Fly   421 DQHYDFF---NKTNSNM-TAMSGDRIATVLFYLTDVEQGGATVFPNIRKAVFPQRGSVVMWYNLK 481
            ..|.||.   |..:||. ....|:|:||.:......|:||.|:||.:........|...:|:|..
 Worm   183 ALHTDFLTFANAEDSNRHFGEMGNRLATFIMVFKKAEKGGGTLFPQLGNVFRANPGDAFLWFNCN 247

  Fly   482 DNGQIDTQTLHAACPVIVGSKWVCNKWIREREQIFSRP 519
            .|.:.:.::||..||:..|.|.:...|||    ||::|
 Worm   248 GNLEREAKSLHGGCPIRAGEKIIATIWIR----IFNQP 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528
TPR_11 179..250 CDD:290150
TPR repeat 179..213 CDD:276809
TPR repeat 218..248 CDD:276809
P4Hc 339..510 CDD:214780 45/203 (22%)
C14E2.4NP_001359861.1 P4Hc 100..276 CDD:214780 45/203 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3137
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.720

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