DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaPV and LOC100492280

DIOPT Version :9

Sequence 1:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_031761347.1 Gene:LOC100492280 / 100492280 -ID:- Length:552 Species:Xenopus tropicalis


Alignment Length:543 Identity:176/543 - (32%)
Similarity:269/543 - (49%) Gaps:74/543 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 TSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRLENDKARSSTEEYLSNPLNSFSL 98
            ||:..|..||:.|..|:.:|:||....|:||..:::....|....|.|....|.:|.:|:|:|.|
 Frog    22 TSIGHMTDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWADKLDHLTDTATKDPEGFLGHPVNAFKL 86

  Fly    99 IRRMNRDWI-IWQLYMDDPVGISQVERIQELREHMPTHTDVEEAVTALDRIQSTYGLKVPEISHG 162
            ::|:|.:|: :..|.:.| :....:..:...|::.|...|...|..||.|:|.||.|....||.|
 Frog    87 MKRLNTEWVKLENLILKD-ISDGFISNLTIQRQYFPNDEDQTGAAKALLRLQDTYNLDTDTISKG 150

  Fly   163 FLNGKQYNVSLTVLDTYAMGQILFDQKNYLAAASWIYQSVVLMEAFSMAAPLEISKNEVRMVYAE 227
            .|.|.::..|||..|.:.:|:..:...:|.....|:.|::..::|..     |.|.::| ||...
 Frog   151 NLPGVKHKTSLTAEDCFDLGKTAYTDADYYHTELWMEQALSQLDAGE-----ESSLDKV-MVLDY 209

  Fly   228 TLLKLNQHADALKVVNIALTDNPHDIKLLLKKSEIETMIRTGTNN----------------APPV 276
            ....:.|..|..|.:.:.        ||||   |::...:.|..|                :.|.
 Frog   210 LSYAVYQQGDLDKALTLT--------KLLL---ELDPEHQRGNGNLRYFEYIMSKESNKSSSSPS 263

  Fly   277 KVQATGVPTA-----------YQIGCRGQ---FPPSADSKLYCLY-NRTTSPFLILAPLKMELVG 326
            :....|....           |:..|||:   .......:|:|.| :....|.|||:|.|.|...
 Frog   264 EGAELGTRKGRPKDHLPERQKYEKLCRGEGVKMTSRRQKRLFCRYFDGNKDPLLILSPTKQEDEW 328

  Fly   327 LDPYMVLYHDVLSPKEIKELQGMATPGL----------------------KRATVYQASSGRNEV 369
            ..|.:|.|||::|.:||.:::.:|.|.|                      :||||:...:|:...
 Frog   329 DKPRIVRYHDIISDEEISKVKELAKPRLRRATISNPITGVLETAQYRISKRRATVHDPQTGKLTT 393

  Fly   370 VKTRTSKVAWFPDGYNPLTVRLNARISDMTGFNLYGSEMLQLMNYGLGGHYDQHYDFFNKTNSN- 433
            .:.|.||.||.....:|:..|||.||..:||.::..:|.||:.|||:||.|:.|:||..|...: 
 Frog   394 AQYRVSKSAWLSAYEDPVVARLNRRIEGVTGLDMSTAEELQVANYGMGGQYEPHFDFARKDEPDA 458

  Fly   434 -MTAMSGDRIATVLFYLTDVEQGGATVFPNIRKAVFPQRGSVVMWYNLKDNGQIDTQTLHAACPV 497
             ....:|:|:||.|||::|||.|||||||.:..||:|::|:.|.||||.::|:.|..|.||||||
 Frog   459 FKELGTGNRVATWLFYMSDVEAGGATVFPEVGAAVYPKKGTAVFWYNLFESGEGDYSTRHAACPV 523

  Fly   498 IVGSKWVCNKWIREREQIFSRPC 520
            :||:|||.||||.||.|.|.|||
 Frog   524 LVGNKWVSNKWIHERGQEFRRPC 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528 40/129 (31%)
TPR_11 179..250 CDD:290150 13/70 (19%)
TPR repeat 179..213 CDD:276809 5/33 (15%)
TPR repeat 218..248 CDD:276809 6/29 (21%)
P4Hc 339..510 CDD:214780 80/194 (41%)
LOC100492280XP_031761347.1 P4Ha_N 24..111 CDD:400573 25/87 (29%)
P4Hc 341..536 CDD:214780 80/194 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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