DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31021 and P4ha3

DIOPT Version :9

Sequence 1:NP_733392.2 Gene:CG31021 / 43638 FlyBaseID:FBgn0051021 Length:453 Species:Drosophila melanogaster
Sequence 2:XP_006508007.1 Gene:P4ha3 / 320452 MGIID:2444049 Length:551 Species:Mus musculus


Alignment Length:536 Identity:123/536 - (22%)
Similarity:198/536 - (36%) Gaps:135/536 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ERNLLQNMRDYAEKLEEKI-DLINNYVEDYNVDIEDANEDPEKYLSNPLNSFRLIRHMHQDWVGW 68
            ||.||..:|.|....|.:: ||...|.:     :...:||.:..:.|||.:|.||:.:..|   |
Mouse    42 ERRLLGTLRRYLRGEEARLRDLTRFYDK-----VLSLHEDLKIPVVNPLLAFTLIKRLQSD---W 98

  Fly    69 QVYMEDLVAPEAV-------QKVESLLPQLPQKEAFRKAARSVHSLTQFY--------------- 111
            :..:..|.|.|.:       :|||.   .||..|....|||::..|...|               
Mouse    99 RNVVHSLEATENIRALKDGYEKVEQ---DLPAFEDLEGAARALMRLQDVYMLNVKGLARGVFQRV 160

  Fly   112 -GYEPADLVAKDERSSSLHLSPLDCYHLG--------LEL-YEEQDYLGAAKWLQVA------AH 160
             |....||.:..:..|   |:..||:.:|        |:: |:..||..|..||:.|      ||
Mouse   161 TGSSITDLYSPRQLFS---LTADDCFQVGKPSCGSRSLQVAYDTGDYYHAIPWLEEAVSLFRRAH 222

  Fly   161 N------------------------------YTLSRHRDLFNPLGAPRWQVYRDLGRTLLKLNRQ 195
            .                              .:|||...:::|..       :.:.|.:||    
Mouse   223 GEWKTEDEASLEDALDYLAFACFQVGNVSCALSLSREFLVYSPDN-------KRMARNVLK---- 276

  Fly   196 CAYDAYESALRLNSQNVHLMKEAGQMELFSLRDPMEPILDLQPKPTVLEKYCR--GEVPRHQ--G 256
                 ||   ||.::|.|.|  |.:.   :::.|..|  .||.:.| .|..|:  |..|.|.  .
Mouse   277 -----YE---RLLAENGHQM--AAET---AIQRPNVP--HLQTRDT-YEGLCQTLGSQPTHYQIP 325

  Fly   257 RLTCELNDWVHSFLAYAPIKFEDLQQDPFIILYPGSIYEQEIRHVENAYER-------CPPNDRF 314
            .|.|........:|...|.:.|.:...|.|.||...:.::|.:.:....|.       .....:.
Mouse   326 SLYCSYETNSSPYLLLQPARKEVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQRSVVASGEKQL 390

  Fly   315 ELKLGISGCS-ISDGYSPVLKRINERILDMAGVE---KTWDTFYIVEYAQLAPFEPFKLFRNSTK 375
            :::..||..: :.|...|:|..::.||..:.|::   ...:...:|.|.....:||......|..
Mouse   391 QVEYRISKSAWLKDTVDPMLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPS 455

  Fly   376 FPKLNLMNFEDVEAKVIIFLKDVTLGGAFTMPNGDILVQPKRGNVLITFEN-----EEHSTTI-- 433
            .|...:.:...| |..:|:|..|..|||.....|:..| |...|..:.:.|     |....|:  
Mouse   456 SPLYRMKSGNRV-ATFMIYLSSVEAGGATAFIYGNFSV-PVVKNAALFWWNLHRSGEGDGDTLHA 518

  Fly   434 -CPIIEGTGLVMIKFI 448
             ||::.|...|..|:|
Mouse   519 GCPVLVGDKWVANKWI 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31021NP_733392.2 P4Ha_N 1..119 CDD:285528 36/137 (26%)
P4ha3XP_006508007.1 P4Ha_N 31..157 CDD:369820 34/125 (27%)
P4Hc 363..535 CDD:214780 37/174 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839330
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.830

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