DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31021 and dpy-18

DIOPT Version :9

Sequence 1:NP_733392.2 Gene:CG31021 / 43638 FlyBaseID:FBgn0051021 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_499464.1 Gene:dpy-18 / 176569 WormBaseID:WBGene00001077 Length:559 Species:Caenorhabditis elegans


Alignment Length:526 Identity:119/526 - (22%)
Similarity:197/526 - (37%) Gaps:121/526 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLNLERNLLQNMRDYAEKLEEKIDLINNYVEDYNVDIEDANEDPEKYLSNPLNSFRLIRHMHQDW 65
            :|..|||:.:.:..|....||::..:....|:|:...|.:.|:..|.::||:|:|.||:....||
 Worm    28 LLETERNIPKILDKYIHDEEERLVQLKKLSEEYSKKNEISIENGLKDITNPINAFLLIKRKIFDW 92

  Fly    66 VGWQVYMEDLVAPEAVQKVESLLPQLPQKEAFRKAARSVHSLT-QFYG--YEPAD---------- 117
                            :::||       |....||...|.|:| ..||  |..||          
 Worm    93 ----------------KEIES-------KMNANKAGNVVSSITDDSYGVRYPTADDLSGAAIGLL 134

  Fly   118 -------LVAKDERSSSLH-------LSPLDCYHLGLELYEEQDYLGAAKWLQVAAHNYTLSRHR 168
                   |..||.....::       .|..||:.:....|.|.|:.....|::.|..     |..
 Worm   135 RLQDTYRLDTKDLADGKIYADQGNYTFSAKDCFEIARAAYNEHDFYHTVMWMEEAQR-----RLG 194

  Fly   169 DLFNPLGAPRWQVYRDLGRTLLKLNRQCAYDAYESALRLNSQ-------------NV----HLMK 216
            |...|..... .:...|...|.|.|.      .:.||:|..:             ||    .|::
 Worm   195 DEVEPTVEVE-DILEYLAFALYKQNN------LKHALKLTEELYKMNPTHPRAKGNVKWYEDLLE 252

  Fly   217 EAGQMELFSLRDPMEPILDLQP-------KPTVLEKYCRGEVPRHQ---GRLTCEL-NDWVHSFL 270
            :.| :....:|..:.||.:.:|       :.|:.|..||.|||..|   .||.|.. .|  ..||
 Worm   253 QEG-VRRSDMRKNLPPIQNRRPDSVLGNTERTMYEALCRNEVPVSQKDISRLYCYYKRD--RPFL 314

  Fly   271 AYAPIKFEDLQQDPFIILYPGSIYEQEIRHVENAYE----RCPPNDRFELKLGISGCSIS----- 326
            .|||||.|..:.:|..:|:...|.:.|:..::...:    |...:|....||..:...||     
 Worm   315 VYAPIKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSAWL 379

  Fly   327 -DGYSPVLKRINERILDMAGVE-KTWDTFYIVEYAQLAPFEPFKLFRNSTKFPKLNLMNFEDVE- 388
             :....|::.:|:||..|..:| :|.:...|..|.....::|.  |.::.|...   .:||.:. 
 Worm   380 KEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPH--FDHAKKEES---KSFESLGT 439

  Fly   389 ----AKVIIFLKDVTLGGAFTMPNGDILVQPKRGNVLITFE-------NEEHSTTICPIIEGTGL 442
                |.|:.::...:.||..........:.|.:.:.|..:.       |.:.....||::.|...
 Worm   440 GNRIATVLFYMSQPSHGGGTVFTEAKSTILPTKNDALFWYNLYKQGDGNPDTRHAACPVLVGIKW 504

  Fly   443 VMIKFI 448
            |..|:|
 Worm   505 VSNKWI 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31021NP_733392.2 P4Ha_N 1..119 CDD:285528 33/137 (24%)
dpy-18NP_499464.1 P4Ha_N 21..152 CDD:285528 36/146 (25%)
P4Hc 338..511 CDD:214780 34/178 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391515at2759
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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