DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6R and YTA7

DIOPT Version :10

Sequence 1:NP_651811.1 Gene:Rpt6R / 43635 FlyBaseID:FBgn0039788 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_011786.1 Gene:YTA7 / 853186 SGDID:S000003502 Length:1379 Species:Saccharomyces cerevisiae


Alignment Length:438 Identity:130/438 - (29%)
Similarity:207/438 - (47%) Gaps:91/438 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RNELNLKVRLLREELQLLQE-----QGSYIAEVVKP-----------------MDKNKVLVKVH- 84
            |||    ...|.:|::.|||     :..::.|..||                 :|||...:..| 
Yeast   242 RNE----ALTLADEIRELQEDSPIREKRFLRERTKPVNYKLPPPLTASNAEEFIDKNNNALSFHN 302

  Fly    85 PE-----------------------------GKYVVDV-DKTINIKDVTPSSRVALRNESYTL-- 117
            |.                             |..|..: .|..|..:..||:.....|....|  
Yeast   303 PSPARRGRGGWNASQNSGPTRRLFPTGGPFGGNDVTTIFGKNTNFYNQVPSAFSDNNNNKLILDS 367

  Fly   118 ----HKILPNKVDPLVSLMLVEK-------VPD---------STYEMVGGLDKQIQEIKEVIELP 162
                .:|||..|.|.......:|       :.|         ..::.:||||..|.::||::.||
Yeast   368 DSSDDEILPLGVTPKTKKENTQKKKKKKPEIADLDPLGVDMNVNFDDIGGLDNYIDQLKEMVALP 432

  Fly   163 VKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVA-----HHTECTFIRVSGSELVQKFIGEGS 222
            :.:|||:....||.|:|||.:|||||||||:|||:|     ...:.||....|::::.|::||..
Yeast   433 LLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGADILSKWVGEAE 497

  Fly   223 RMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTGDSEVQRTMLE-LLNQLDGFEATKNIKVIM 286
            |.:|.||..|::|.|||||.||||.:...|   .:...::..:::. ||..:||.:....:.||.
Yeast   498 RQLRLLFEEAKKHQPSIIFFDEIDGLAPVR---SSKQEQIHASIVSTLLALMDGMDNRGQVIVIG 559

  Fly   287 ATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGIN-LRKIAEEMPGASGA 350
            ||||.|.:|.||.||||.||:..||.|:.:||..||:|.:||.:.....| :.|:|....|..||
Yeast   560 ATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQIQTRKWSSPLSTNFIDKLAFLTKGYGGA 624

  Fly   351 EVKGVCTEAGMYALRERRVHVTQEDFEMAV--SKVMMKDSEKNMSIRK 396
            :::.:||||.:.:::.....:.:.:.::.|  ||:.:|.|:..::::|
Yeast   625 DLRSLCTEAALISIQRSFPQIYRSNDKLLVDPSKIKVKVSDFMLALKK 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6RNP_651811.1 PRK03992 21..395 CDD:179699 129/435 (30%)
YTA7NP_011786.1 RecA-like_Yta7-like 414..583 CDD:410925 73/171 (43%)
AAA_lid_3 611..649 CDD:465537 9/37 (24%)
AAA 772..>839 CDD:459627
Bromo_TBP7_like 979..1098 CDD:99923
Blue background indicates that the domain is not in the aligned region.

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