Protein Alignment Rpt6R and RPT3

DIOPT Version :10

• Sequence 1: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_200637.1
• Gene: RPT3 / 835941
• AraportID: AT5G58290
• Length: 408
• Species: Arabidopsis thaliana
• Alignment Length: 363
• Identity: 169/363 - (46%)
• Similarity: 237/363 - (65%)
• Gaps: 21/363 - (5%)

  Fly    24 ELQFT------VNERQKNLLR--LQAQRNELNLKVRLLREELQLLQEQGSYIAEVVKPMDKNKVL 80
            :|:||      |.:.||||.|  |:||            ||::.:|.....|.:.::.:|:|..:
plant    40 QLEFTDIQEEYVKDEQKNLKRELLRAQ------------EEVKRIQSVPLVIGQFMEMVDQNNGI 92

  Fly    81 VKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEKVPDSTYEMV 145
            |.......|.|.:..|||.:.:.||:.|||...|..|..:||.:.|..:||:...:.||.:|..:
plant    93 VGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDI 157

  Fly   146 GGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 210
            ||.|.|.|||:|.:|||:.|.||:..:||..|:|||||||||||||:||:|||:||...||||.|
plant   158 GGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVG 222

  Fly   211 SELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTG-DSEVQRTMLELLNQLD 274
            ||.|||::|||.||||::|.:|:|:||:|||:||:|:|.:||.:..|| |.||||.::|||||:|
plant   223 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMD 287

  Fly   275 GFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRK 339
            ||:.|.|:||||||||.|.||.|||||||:|||||||.|:...:..:.::.:.||||:..::|..
plant   288 GFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLED 352

  Fly   340 IAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 377
            ........|.||:..:|.||||:|:|:.|..:..:|||
plant   353 YVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 390

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	169/363 (47%)
RPT3	NP_200637.1	PTZ00454	15..408	CDD:240423	169/363 (47%)